DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and Sv2a

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_071313.1 Gene:Sv2a / 64051 MGIID:1927139 Length:742 Species:Mus musculus


Alignment Length:552 Identity:101/552 - (18%)
Similarity:173/552 - (31%) Gaps:190/552 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 VCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTL 272
            :|..:..|.:..:...||:..|..:.|.|:|:.||:..|.||..:.::|..:......:..:|..
Mouse   197 MCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFC 261

  Fly   273 RALLGL-----VSVSVTYSGLILA-------IEYVDGKWRTIAGMYNLFPLPISYMII------- 318
            |.|.|:     :.:..:|....||       :.::...| .|.|:|   ...:::.||       
Mouse   262 RLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFW-MIGGVY---AAAMAWAIIPHYGWSF 322

  Fly   319 -SGLAYLTQDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGR---- 378
             .|.||....::...|....|.:|........|||||:.|..|:.||...:::.....|.|    
Mouse   323 QMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGH 387

  Fly   379 --------------------QLPAD----YQLTPPTQESSTQDVTYLFRSSY---LRRISICFFC 416
                                ::.:|    ||.......|....|...|.|.:   .|||::....
Mouse   388 PERVFSVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFSPEYRRITLMMMG 452

  Fly   417 IWFTMNLVYYGIIL------------------------------------NMSSFGGN------- 438
            :||||:..|||:.:                                    |....||.       
Mouse   453 VWFTMSFSYYGLTVWFPDMIRHLQAVDYAARTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFI 517

  Fly   439 ----------------------------------------------------------------- 438
                                                                             
Mouse   518 GLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLVNSTFLHNKEG 582

  Fly   439 --------------VYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEG 489
                          ||..|.|..|..:|...|:..::.|:|:..:...:.:.:.|:|...:....
Mouse   583 CPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVLSCVSCFFLSFGNS 647

  Fly   490 HADLLWLKITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVG----ACNVAAGLAL-ILTPYL 549
            .:.::.|...|   |..:|::.|. :.|.|.||||:..|....|    .|.:||.|.: |.|.::
Mouse   648 ESAMIALLCLF---GGVSIASWNA-LDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFV 708

  Fly   550 SLLNKIEGHLLMTLLTAWSIFGGFVVLFLPET 581
            .:.....    :...:|....|..:.|.||||
Mouse   709 GITKAAP----ILFASAALALGSSLALKLPET 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 97/548 (18%)
Sv2aNP_071313.1 synapt_SV2 1..742 CDD:130366 101/552 (18%)
Interaction with SYT1. /evidence=ECO:0000250 1..57
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..145
Blue background indicates that the domain is not in the aligned region.

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