DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and Slc22a4

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_071606.1 Gene:Slc22a4 / 64037 RGDID:621149 Length:553 Species:Rattus norvegicus


Alignment Length:541 Identity:157/541 - (29%)
Similarity:269/541 - (49%) Gaps:70/541 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 DETDVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVATWRN 144
            |..:||. .:|.:|.:|.|:..|||...:||.|:..|.::.|...:..|..|..:...  :.|||
  Rat     3 DYDEVIA-FLGDWGPFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHRCLVPHTVNLS--SAWRN 64

  Fly   145 LSGSVD---------NCRRWE----------------GIDWSQVSNETTLPSDWKTPAEMDKKLV 184
            .|..::         :|||:.                .:|..|:..|:.|               
  Rat    65 HSIPLETKDGRQVPQSCRRYRLATIANFSALGLEPGLDVDLEQLEQESCL--------------- 114

  Fly   185 ACEKWEYETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFIS 249
              :.||| :.|...:|..::|:||||.:....:....|.:||..|..:||.|||:||||.:||.:
  Rat   115 --DGWEY-SKDVFLSTIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFAT 176

  Fly   250 AVLQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTI---AGMYNLFPL 311
            ..:||.|.......:::|::..|.|::|:..:|......||..|.:....|.:   .|:...|  
  Rat   177 MAVQTGFSFVQIFSTNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVRILFSTLGVCTFF-- 239

  Fly   312 PISYMIISGLAYLTQDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFN 376
            .|.||::...||..:|::.|.|.:.:||:|...||:.:|||||||:.:.|.:|..:||:.|||.|
  Rat   240 AIGYMVLPLFAYFIRDWRMLLLALTLPGLFCVPLWWFIPESPRWLISQRRFEEAEQIIQKAAKMN 304

  Fly   377 GRQLPADYQLTPPTQ----ESSTQDVTY---LFRSSYLRRISICFFCIWFTMNLVYYGIILNMSS 434
            |...||  .:..|.:    .|..|...:   ||::..:..|::....:|...::.|:.:.||:.:
  Rat   305 GIMAPA--VIFDPLELQELNSLKQQKVFILDLFKTRNIATITVMSVMLWMLTSVGYFALSLNVPN 367

  Fly   435 FGGNVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLIC-AGVACCCAAITEGHADLLWLKI 498
            ..|:||||..|:||:|:||...|..::..:.::::....|.. .||......:.|   |..::.|
  Rat   368 LHGDVYLNCFLSGLIEVPAYFTAWLLLRTLPRRYIIAGVLFWGGGVLLLVQVVPE---DYNFVSI 429

  Fly   499 TFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTP---YLSLLNKIEGHLL 560
            ..:|:|||.:::..:::.|:|||||||.:||:.||..::|:.:..|:.|   ||...|::..::|
  Rat   430 GLVMLGKFGVTSAFSMLYVFTAELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNRLLPYIL 494

  Fly   561 MTLLTAWSIFGGFVVLFLPET 581
            |..||   :..|.:.||.||:
  Rat   495 MGSLT---VLIGIITLFFPES 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 153/529 (29%)
MFS 222..579 CDD:119392 117/370 (32%)
Slc22a4NP_071606.1 2A0119 12..519 CDD:273328 154/531 (29%)
MFS 123..510 CDD:119392 123/396 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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