DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and slc22a23

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001338637.1 Gene:slc22a23 / 555979 ZFINID:ZDB-GENE-030131-3564 Length:942 Species:Danio rerio


Alignment Length:575 Identity:132/575 - (22%)
Similarity:239/575 - (41%) Gaps:102/575 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PKQQAATPQSPAAAVSGLDPADDEDETDVIGDLMGHYGKWQLLMTVLLSLF----QVPNTFHISS 116
            |:....||::..:  .||....|......:|. .|.|.|..:::|.:.::|    |..:.|.:::
Zfish    18 PENGFVTPETSKS--PGLLSQTDGGVLPSVGG-FGKYQKQLIVLTWIPAIFIGFSQFSDNFLLTN 79

  Fly   117 SIYQAANKDFWCQRP----AQLQHM-PVATWRNLSGSVDNCRRWEGIDWSQVSNETTLPSDWKTP 176
            .          |..|    :||..: |.|.     .:|     :.|::....|.....||.:|..
Zfish    80 P----------CPEPHNNSSQLLTVAPTAV-----STV-----FTGVNTEAASQCNCTPSSYKLQ 124

  Fly   177 AEMDKKLVACEKWEYETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFG 241
            ..:::.:|                  ::|:|||:.....::|:...|:|...|.::.|.|:|.||
Zfish   125 NGLEQNIV------------------TKWNLVCDSAWKIHIAKFSLLVGSIFGYLVLGVLADWFG 171

  Fly   242 RKTMLFISAVLQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMY 306
            |..:|.:|.|...:||:.:....:..::.|||...|.....:|.|..:|.||.....||....|.
Zfish   172 RHPVLILSVVFLLVFGMTVAFSVNLPMFGTLRFFEGFCLAGITLSLYVLRIELCLPGWRFSITMV 236

  Fly   307 NLFPLPISYMIISGLAYLTQDYQRLQLCIGIP-GIFLCFLWFVVPESPRWLLVKGRIDEVRRIIE 370
            ..|.:....:::.|||.|.:|:|.||..|..| .:.|.::| ..|||.||||...:....:.|:|
Zfish   237 ANFMMLAGQLLMPGLAALCRDWQILQAVIVCPLLLMLSYIW-AFPESLRWLLATQQYSRSKWIME 300

  Fly   371 AAAKFNGRQLPADYQLTPPTQESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSF 435
            ..:|.|...|          ||.:.:.:|.|..:...:....|...:..|.||....::|.::|.
Zfish   301 RISKKNNINL----------QEDAEELMTELNGALQKQPKKTCIVKMVGTRNLWKNIVVLCVNSL 355

  Fly   436 GG----NVYLNSAL----AGLVE-----------IPAIAVAMYI-----ITKVGKKWLFCATLIC 476
            .|    :.:..|.:    .|.||           :..||||..:     :..:|::......:|.
Zfish   356 TGYGIHHCFARSMMEKKTVGFVEKLHDFYAEYYVMAVIAVASCVFLCPAVALMGRRGGLLMFMII 420

  Fly   477 AGVACCCAA------------ITEGHADLL--WLKITFLMMGKFTISAGNTIMPVYTAELYPTPI 527
            ..:|.....            ::..|:|.|  ...:.|.::|.|:..|.:.:...:.||:.|:.|
Zfish   421 TALASLLQLGLLNLLGKYGDHLSLVHSDELNDKFSVAFSIIGMFSSHAVSNLSIFFCAEITPSVI 485

  Fly   528 RNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTA-WSIFGGFVVLFLPET 581
            |..|:|....:||..::.:|.:.|.|: :|:.|..::.| .::.....:|.||||
Zfish   486 RGGGLGLVLASAGFGMLTSPIMELHNQ-KGYFLHHIIFACCTLICIICILLLPET 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 123/539 (23%)
MFS 222..579 CDD:119392 96/396 (24%)
slc22a23NP_001338637.1 Sugar_tr <131..547 CDD:331684 106/439 (24%)
Atrophin-1 630..>937 CDD:331285
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.010

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