DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and slc22a23

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001338637.1 Gene:slc22a23 / 555979 ZFINID:ZDB-GENE-030131-3564 Length:942 Species:Danio rerio


Alignment Length:575 Identity:132/575 - (22%)
Similarity:239/575 - (41%) Gaps:102/575 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 PKQQAATPQSPAAAVSGLDPADDEDETDVIGDLMGHYGKWQLLMTVLLSLF----QVPNTFHISS 116
            |:....||::..:  .||....|......:|. .|.|.|..:::|.:.::|    |..:.|.:::
Zfish    18 PENGFVTPETSKS--PGLLSQTDGGVLPSVGG-FGKYQKQLIVLTWIPAIFIGFSQFSDNFLLTN 79

  Fly   117 SIYQAANKDFWCQRP----AQLQHM-PVATWRNLSGSVDNCRRWEGIDWSQVSNETTLPSDWKTP 176
            .          |..|    :||..: |.|.     .:|     :.|::....|.....||.:|..
Zfish    80 P----------CPEPHNNSSQLLTVAPTAV-----STV-----FTGVNTEAASQCNCTPSSYKLQ 124

  Fly   177 AEMDKKLVACEKWEYETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFG 241
            ..:::.:|                  ::|:|||:.....::|:...|:|...|.::.|.|:|.||
Zfish   125 NGLEQNIV------------------TKWNLVCDSAWKIHIAKFSLLVGSIFGYLVLGVLADWFG 171

  Fly   242 RKTMLFISAVLQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMY 306
            |..:|.:|.|...:||:.:....:..::.|||...|.....:|.|..:|.||.....||....|.
Zfish   172 RHPVLILSVVFLLVFGMTVAFSVNLPMFGTLRFFEGFCLAGITLSLYVLRIELCLPGWRFSITMV 236

  Fly   307 NLFPLPISYMIISGLAYLTQDYQRLQLCIGIP-GIFLCFLWFVVPESPRWLLVKGRIDEVRRIIE 370
            ..|.:....:::.|||.|.:|:|.||..|..| .:.|.::| ..|||.||||...:....:.|:|
Zfish   237 ANFMMLAGQLLMPGLAALCRDWQILQAVIVCPLLLMLSYIW-AFPESLRWLLATQQYSRSKWIME 300

  Fly   371 AAAKFNGRQLPADYQLTPPTQESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSF 435
            ..:|.|...|          ||.:.:.:|.|..:...:....|...:..|.||....::|.::|.
Zfish   301 RISKKNNINL----------QEDAEELMTELNGALQKQPKKTCIVKMVGTRNLWKNIVVLCVNSL 355

  Fly   436 GG----NVYLNSAL----AGLVE-----------IPAIAVAMYI-----ITKVGKKWLFCATLIC 476
            .|    :.:..|.:    .|.||           :..||||..:     :..:|::......:|.
Zfish   356 TGYGIHHCFARSMMEKKTVGFVEKLHDFYAEYYVMAVIAVASCVFLCPAVALMGRRGGLLMFMII 420

  Fly   477 AGVACCCAA------------ITEGHADLL--WLKITFLMMGKFTISAGNTIMPVYTAELYPTPI 527
            ..:|.....            ::..|:|.|  ...:.|.::|.|:..|.:.:...:.||:.|:.|
Zfish   421 TALASLLQLGLLNLLGKYGDHLSLVHSDELNDKFSVAFSIIGMFSSHAVSNLSIFFCAEITPSVI 485

  Fly   528 RNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTA-WSIFGGFVVLFLPET 581
            |..|:|....:||..::.:|.:.|.|: :|:.|..::.| .::.....:|.||||
Zfish   486 RGGGLGLVLASAGFGMLTSPIMELHNQ-KGYFLHHIIFACCTLICIICILLLPET 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 101/429 (24%)
slc22a23NP_001338637.1 MFS_SLC22A23 108..523 CDD:341002 104/444 (23%)
DUF5585 <565..921 CDD:465521
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.