DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and SVOP

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_061181.1 Gene:SVOP / 55530 HGNCID:25417 Length:548 Species:Homo sapiens


Alignment Length:548 Identity:124/548 - (22%)
Similarity:227/548 - (41%) Gaps:135/548 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 QLQHMPVATWRNLSGSV---DNCRRWE----------GIDWSQVSNETTLPSDWKTPAEMDKKLV 184
            ||:.:||..:|....|.   |:....|          |::..::.:...:|.::..|.: |..:|
Human     7 QLRQLPVVKFRRTGESARSEDDTASGEHEVQIEGVHVGLEAVELDDGAAVPKEFANPTD-DTFMV 70

  Fly   185 --ACE-----KWEYETNDNVGNTWTS-----------------QWDLVCEKEHLKNVAEMFFLLG 225
              |.|     |::::.:...|..|.:                 :|.|...:..|  :..:.| :|
Human    71 EDAVEAIGFGKFQWKLSVLTGLAWMADAMEMMILSILAPQLHCEWRLPSWQVAL--LTSVVF-VG 132

  Fly   226 VATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTLRALLGL----VSVSVTY- 285
            :.:...:.|.:||::||||.|.||.:....:|:.......:...|.||.|:|.    |..|||. 
Human   133 MMSSSTLWGNISDQYGRKTGLKISVLWTLYYGILSAFAPVYSWILVLRGLVGFGIGGVPQSVTLY 197

  Fly   286 ---------SGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYLTQDYQRLQLCIGIPGIF 341
                     :..||.||..   |    .:..:|.:.::..::..|.     ::.|.:...:|.:.
Human   198 AEFLPMKARAKCILLIEVF---W----AIGTVFEVVLAVFVMPSLG-----WRWLLILSAVPLLL 250

  Fly   342 LCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADYQLTPPTQESSTQDVTYLFRSSY 406
            ...|.|.:|||.|:.::.|..::....::..|..||..:|.. :|....||...: :..|| :.:
Human   251 FAVLCFWLPESARYDVLSGNQEKAIATLKRIATENGAPMPLG-KLIISRQEDRGK-MRDLF-TPH 312

  Fly   407 LRRISICFFCIWFTMNLVYYGIILNMSSF--GGNV-------------------------YLNSA 444
            .|..::..:.|||:....|||::|..:..  .|:|                         |::..
Human   313 FRWTTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEEDYMDLL 377

  Fly   445 LAGLVEIPAIAVAMYIITKVGKK---------WLFCATL--ICAGVACCCAAITEGHADLLWLKI 498
            ...|.|.|.:.|.::||.::|:|         :.||:.|  ||.|            .::|.|  
Human   378 WTTLSEFPGVLVTLWIIDRLGRKKTMALCFVIFSFCSLLLFICVG------------RNVLTL-- 428

  Fly   499 TFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTL 563
             .|.:.:..||.|.....|||.|:|||..|.:|:|.|:..|.:..::||:::.: .:|..:.:||
Human   429 -LLFIARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQV-MLESSVYLTL 491

  Fly   564 LTAWSIFGGFVVL------FLP-ETAVR 584
                :::.|..:|      ||| ||..|
Human   492 ----AVYSGCCLLAALASCFLPIETKGR 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 121/543 (22%)
MFS 222..579 CDD:119392 98/414 (24%)
SVOPNP_061181.1 MFS_SVOP 87..509 CDD:340999 103/459 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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