DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and CG4462

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_650849.1 Gene:CG4462 / 42376 FlyBaseID:FBgn0038752 Length:573 Species:Drosophila melanogaster


Alignment Length:594 Identity:148/594 - (24%)
Similarity:253/594 - (42%) Gaps:115/594 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 AKQSPTTSPTIPP--------KQQAATPQSPAAAVSGLDPADDEDETDVIGDLMGHYGKWQLLMT 100
            |:...:|:|.|.|        |:.|..|.:||.             :|||.|::|.:|.|||...
  Fly     7 ARGGESTAPHILPNEMENDVDKRIATPPPAPAG-------------SDVIADVVGDFGIWQLRTI 58

  Fly   101 VLLSLFQVPNTFHISSSIYQA----ANKDFWCQRPAQLQHMPVATWRNLSGSVDNCRRWEGIDWS 161
            :::.|.::|..:.::..|:..    ...:|.|    ...::..::..:.|.|.:.|         
  Fly    59 LIIFLCKIPAAWFMACIIFTGPELYPGSEFTC----DTSYLTSSSNSSFSISDNQC--------- 110

  Fly   162 QVSNETTLPSDWKTPAEMDKKLVACEKWEYETN-DNVGNTWTSQWDLVCEKEHLKNVAEMFFLLG 225
            .|.:|:|     .|.:|       ||::.|.:: |::    ..|::|||.::......:.:.|.|
  Fly   111 YVLDEST-----GTSSE-------CEQFNYVSSFDSL----IMQFNLVCLRDIFVAWTQYWHLFG 159

  Fly   226 VATGGIISGYLSDKFGRKTMLFIS--------AVLQTIFGLWLYICSSFELYLTLRALLGLVSVS 282
            |..||::        |.|.||.||        ||.|.:.|:.......|.|:...|.|..:....
  Fly   160 VLVGGVM--------GTKMMLGISPRSTYCVGAVAQILCGVVTGYARDFSLHCAFRCLSAVCCAI 216

  Fly   283 VTYSGLILAIEYVDGKWRTIA-GMYNLFPLPISYMIISGLAYLTQDYQRLQLCIGIPGIFLCFLW 346
            :..:|..:..:...|..|..| .:|:.| ..|..:::.||:.....:..:.:.|..|.|.|..|.
  Fly   217 MFTAGQAIFADITAGMHRIGAIILYDTF-WSIGVILLPGLSSFFNSWSLIYVGITFPTIMLILLL 280

  Fly   347 FVVPESPRWLL----VKGRIDEVRRIIEAAAKFNGR--QLPADY--QLTPPTQESSTQDV----T 399
            :..|:||||||    .:..||.|.:|:...|..|.|  ::|.|:  ||...::....|..    |
  Fly   281 YWTPDSPRWLLRHAADRFSIDNVEQILREGAAINDRSFKIPPDFRQQLEQLSERLKAQPPPAPWT 345

  Fly   400 YLFRSSYLR------RISICFFCIWFTMNLVYYGIILNMSSFGGNVYL--NSALAGLVEIPAIAV 456
            .|::....:      .:::.||.|.|      .|::||:.|||.: ||  |:...|..||....:
  Fly   346 ELWKGKRAKTHMVAAHLALAFFVINF------MGMLLNIRSFGRD-YLVPNTIAMGFSEIIGCFL 403

  Fly   457 AMYIITKVGK-KWLFCATL--ICAGVACCCAAITEG----HADL---LWLKITFLMMGKFTISAG 511
            |::...|..| ||. ||.:  |.||:..|...|...    .|||   ||:.|.  .:.|..:|..
  Fly   404 ALHFTLKHNKWKWQ-CAGVFNILAGILGCMGWIFTNADSMDADLKVSLWMIIA--TIPKAAVSCA 465

  Fly   512 NTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFV-- 574
            .:::.....||.|...:.:.|.:....|.:.|:..|:.::|.||:..:.:|....:||.||..  
  Fly   466 QSMILACMNELMPANKKQLFVFSVVTWARVWLLSAPFFNVLRKIDTAMSLTSYCVFSILGGICTS 530

  Fly   575 VLFLPETAV 583
            :|..|..:|
  Fly   531 LLLTPRLSV 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 112/431 (26%)
CG4462NP_650849.1 MFS_SLC22 123..533 CDD:340875 113/432 (26%)

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