DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and slc22a4

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:529 Identity:136/529 - (25%)
Similarity:242/529 - (45%) Gaps:51/529 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVATWRNLS- 146
            |.|...:|.:|.:||.:.:.|::..:||.|.....::........|..|.|:....|  ||:.: 
Zfish     5 DDITSFLGTWGPFQLTVFLALAISILPNGFVGLYIVFVGDTPAHECLIPEQINISSV--WRDAAI 67

  Fly   147 ------GSV--DNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVACEK----WEYETNDNVGN 199
                  |.:  .:|.|:......|:|.....|:     .|::...:..|.    |.| :.:...:
Zfish    68 PTQMQDGVLKRSSCSRYRLDTLRQLSMLNYTPN-----VEVNLSQIETEPCVDGWSY-SQEFYQS 126

  Fly   200 TWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICS 264
            |..::||||||:|:...:....:..||..|..:||.:||::||:.:||....||||..|......
Zfish   127 TIVTEWDLVCEREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVLFTMMALQTITILIQMFSP 191

  Fly   265 SFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLF-PLPISYMIISGLAYLTQDY 328
            |:|::..:...:|....|......:|..|.:....|.:.|...:| ...|..|.....||..:.:
Zfish   192 SWEVFSAIYFFVGFSGFSNYVVAYVLGSEILSPASRVLFGSLGVFMGSGIGQMFFPLAAYFIRSW 256

  Fly   329 QRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADYQLTPP---- 389
            :.|.|...:.|:....||:.:||||||||.:||..|...::..||:.|        ::|.|    
Zfish   257 RWLVLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRRAAEKN--------RVTAPEVIF 313

  Fly   390 ------------TQESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLN 442
                        .|:.|..|:  |...:.:..|.||.. :|..:.:.||.:|||.::..||.|||
Zfish   314 SSSEIEEAAKKRIQKHSILDI--LSNCNAVSTILICSL-LWMVITMSYYALILNTTNLHGNPYLN 375

  Fly   443 SALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLKITFLMMGKFT 507
            ..|:.:||:||..:|..::....::....:||:..|.......:..  .:|..|.....|:||..
Zfish   376 FFLSAVVEVPAYIIAALLLRFCSRRICQASTLLLGGALIFIIQLIP--TELQGLATALEMLGKLC 438

  Fly   508 ISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGG 572
            ::|...::...|:||:||.:||:.:|:|::.|.:..|::|::..|.....::...::...::|.|
Zfish   439 VTAAFCVVYAVTSELFPTVVRNMAMGSCSMTARIGSIISPFIIYLGNYYRYIPYIVIGGLALFSG 503

  Fly   573 FVVLFLPET 581
            .:.|.|||:
Zfish   504 VMSLLLPES 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 109/406 (27%)
slc22a4NP_957143.1 MFS_SLC22A4_5_OCTN1_2 106..510 CDD:340934 110/417 (26%)

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