DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and F23F12.13

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001033356.1 Gene:F23F12.13 / 3896740 WormBaseID:WBGene00044455 Length:528 Species:Caenorhabditis elegans


Alignment Length:408 Identity:95/408 - (23%)
Similarity:167/408 - (40%) Gaps:71/408 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 VAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTLRALLG--LV 279
            ||.:.| :||..|.|..|:|.|.||||.:.|....:..:||:......|:|::...|.::|  :.
 Worm    99 VATIQF-IGVLIGAITYGHLGDHFGRKPVSFFGISVGILFGVASGFAPSWEVFAAFRFIVGTSIA 162

  Fly   280 SVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYLTQDYQRLQLCIGIPGIFLCF 344
            |:.:.:...||  |:::.:.|...                 .::....|.||...:   ..|:|.
 Worm   163 SILIVFYAYIL--EFIEPEQRVFL-----------------RSFFNWGYARLVFTL---ACFICG 205

  Fly   345 LW------------------FVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPAD----YQLT 387
            .|                  .::||||:|...|.|..:.|...:..|..:|.....|    .:::
 Worm   206 YWRSAAIATSLLSLPILPVLLILPESPKWFNTKKRFRDARAAEKRVAWLSGIPYVNDEDQSIEIS 270

  Fly   388 PPTQESSTQDVTY--LFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVE 450
            ...:|.||:..|.  ||.|..:...:|....:||:.:|..:|..||..:..||.||:..::|.|.
 Worm   271 EKLEEKSTKIYTMKDLFTSWTIAYRTIVVGSLWFSTSLSAFGSDLNSGNLAGNFYLSQFVSGAVT 335

  Fly   451 IPAIAVAMYIITKV---GKKWLFCATLICAGVACCCAAI-----------TEGHADLLWLKITFL 501
            ..|......:.|.|   .::.|.....| |.:.|.|..:           ::|..||..:.|..:
 Worm   336 AFAKIFVFLLDTYVPSFDRRRLHQYPQI-AMILCYCVIMVLMILPESDCGSQGSRDLAIIIINII 399

  Fly   502 MMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTP---YLSLLNKIEGHLLMTL 563
            .:....|:.....:  ...|.:||.||.:|:|.|::.|....:|.|   |||.:.:...:.::..
 Worm   400 GVSFIEITWDACYL--VAVECFPTKIRTIGIGTCSLLARTGALLAPQMAYLSDIYRPAPYAVVCS 462

  Fly   564 LTAWSIFGGFVVLFLPET 581
            :...|:.  ...:|||:|
 Worm   463 IGTISLL--ISCVFLPDT 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 94/406 (23%)
MFS 222..579 CDD:119392 90/399 (23%)
F23F12.13NP_001033356.1 MFS 74..476 CDD:391944 92/404 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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