DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and CG42269

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster


Alignment Length:566 Identity:151/566 - (26%)
Similarity:266/566 - (46%) Gaps:46/566 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 AAVSGLDPADDEDETDVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHIS----SSIY-QAANKDFW 127
            |..:|.|......:.|.|..|:|.:|::|.|:.:.:    :|.:|.::    |.|: ....:..|
  Fly    58 AGGNGSDSLPPSMDFDDILPLIGEFGRYQKLLFICM----IPFSFFVAFVYFSQIFLTLIPEQHW 118

  Fly   128 CQRPAQLQHMPVATWRNLS-----GSVDNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVACE 187
            |..| :|..:.|.....||     |..:||..:: ::::.:..:..:.:|.|.|.      |.|.
  Fly   119 CHVP-ELDGLDVEARLALSIPMTNGEYNNCYMYD-VNYTDILAQGKVMADPKWPQ------VKCR 175

  Fly   188 K-WEYETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAV 251
            . |.|...:....|..::.:.||:...|...|:..|.||...||::.|:::|:|||...|..:.:
  Fly   176 HGWSYNFTEIPYATVATEQNWVCDDAALPTYAQSIFFLGAIVGGLLFGWVADRFGRIPALIGTNM 240

  Fly   252 LQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRT-IAGMYNLFPLPISY 315
            :..:.|:.....|:|..:..:|..:|....:......||.:|||..|:|| :|.|........:.
  Fly   241 MGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFTMMYILVLEYVGPKYRTFVANMSIAIFFTGAA 305

  Fly   316 MIISGLAYLTQDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQL 380
            .::..:||...|::.|.:....|.:...|..||||||.|||:.:|::|:...|::...|.||||:
  Fly   306 CLLPWIAYFLADWKLLAIVTSAPLLLAIFTPFVVPESARWLVSQGKVDKAVGILKKLEKGNGRQV 370

  Fly   381 PAD-YQLTPPT----QESSTQDVTY----LFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFG 436
            |.. ||:...:    ||...|:..|    ||:|..|||.::....||..::||:.|.:.|:.|.|
  Fly   371 PPQTYQIFTDSCKRMQEQEAQNGKYSVLDLFKSPRLRRTTLLLIVIWMAISLVFDGHVRNVGSLG 435

  Fly   437 GNVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLKITFL 501
            .:::....||...|:||..:...|:.:.|::||.|::::.:||....|.:    ..:........
  Fly   436 LDIFFTFTLACFTELPADTLLTVILDRFGRRWLACSSMVLSGVFSLLATV----VPVGIYSAALA 496

  Fly   502 MMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTA 566
            :||:|.::....|...:.||:.||.:|...|...::...:|.|:.|::..|..|...|.:.:|..
  Fly   497 IMGRFFVNISYNIGLQWAAEVLPTVVRAQAVAFIHIMGYVASIIAPFVVYLANISQALPLIILGI 561

  Fly   567 WSIFGGFVVLFLPETA--VRQKTDNQGGSSANASA-------AKQV 603
            ..|.||.:.|.||||.  |..:|.:.|.......:       ||||
  Fly   562 LGIIGGLLALLLPETLNHVLPQTLSDGEEFGRGQSIWDFPCLAKQV 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 136/511 (27%)
MFS 222..579 CDD:119392 104/366 (28%)
CG42269NP_648019.2 2A0119 80..552 CDD:273328 128/487 (26%)
MFS 206..545 CDD:119392 97/342 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 100 1.000 Domainoid score I351
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 97 1.000 Inparanoid score I321
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
66.060

Return to query results.
Submit another query.