DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and CG31272

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_650013.3 Gene:CG31272 / 326130 FlyBaseID:FBgn0051272 Length:563 Species:Drosophila melanogaster


Alignment Length:503 Identity:101/503 - (20%)
Similarity:173/503 - (34%) Gaps:176/503 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 KNVAEMFFLLGVATGGIISGYLSDKFGRKTMLF----ISAVLQTIFGLWLYICSSFELYLTLRAL 275
            |.|.......|:....|..|||:|..|||.:|:    |.||  .:||..|  ..:|.:.:..:.|
  Fly    97 KGVLNAVAYAGMTISAIAWGYLADTKGRKKILYWGYLIDAV--CVFGSAL--SQNFSMLVMFKFL 157

  Fly   276 LGLV-----SVSVTYSGLILAIEYVDGKWRT----IAGM-------------YNLFPLPISYMII 318
            .|||     :|..||     ..|....|.|:    |.||             :.:||....:. .
  Fly   158 GGLVVNGPAAVLFTY-----LTEMHGPKHRSSVLMIVGMVTSTATVSLPLLAWGIFPRDWDFE-F 216

  Fly   319 SGLAYLTQDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPAD 383
            .||.  ...:|.....:|||.:....::..:|||||:|:.:||.:|..:..:.....|.|:....
  Fly   217 WGLQ--VHSWQIFLFVLGIPSLISGLIFCSMPESPRFLMAQGRNEEALQAFKQIYHVNTRKPKDS 279

  Fly   384 YQLTP-----PTQESSTQDVTY-------------------------------LFRSSYLRRISI 412
            |.:..     |.::::..:|.|                               |.|...| .::|
  Fly   280 YPIKALIQEVPNRKAAQNEVIYTIEEKSGEVPTKRQSRTLAESLRAGLQQMKPLVRKPLL-GLAI 343

  Fly   413 CFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIPA------------------------ 453
            |.:       ::.:||.|.|::.  .::|....|.:.|..|                        
  Fly   344 CCY-------VMQFGIFLGMNTI--RLWLPQLFASMAEYEALHAGDGLDVSMCTILEFSVNQTAE 399

  Fly   454 --------------IAVAMY----IITKVGKKWLFCATLICAGVACCCA---AITEGHADLLWLK 497
                          |::.||    |::..|    |.......|:.....   .:|.|    |:|.
  Fly   400 TALNYADACSEPKVISMDMYLNNIIVSATG----FVGYFFAGGILRALGPKRMMTYG----LFLS 456

  Fly   498 ITFLMMGKFTISAGNTIMPVYT----------------AELYPTPIRNVGVGACNVAAGLALILT 546
            .||.:|..|::|:..|::...|                ..|:||.:|.|.|       .:|::..
  Fly   457 GTFGLMLYFSVSSLMTLIVSATFLTITGIAVSSLLGAVVALFPTQLRTVVV-------AIAMMCG 514

  Fly   547 PYLSLLNKIEGHLL------------MTLLTAWSIFGGFVVLFLPETA 582
            .:    ..:.|:||            ..::::..|..|.:.:.||:.|
  Fly   515 RF----GALSGNLLFPVFVQTGCLPPFIMVSSVLILSGILSISLPDPA 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 98/498 (20%)
CG31272NP_650013.3 synapt_SV2 15..556 CDD:130366 99/499 (20%)

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