DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and Slc22a30

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_795976.1 Gene:Slc22a30 / 319800 MGIID:2442750 Length:552 Species:Mus musculus


Alignment Length:539 Identity:140/539 - (25%)
Similarity:237/539 - (43%) Gaps:76/539 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 MGHYGKWQLL---MTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPA-----------------Q 133
            :|..|::|:|   ..:.|....||   ||:...:.||..:..|..|.                 .
Mouse    10 VGSLGRFQILQISFVLFLVGLVVP---HITMENFTAAIPNHRCWAPILDNDTASDNGSRILSQDD 71

  Fly   134 LQHMPVATWRNLSGSVDNCRRWEGIDW------SQVSNETTLPSDWKTPAEMDKKLVAC-EKWEY 191
            |..:.:....||  .:|.|||:....|      ...||||          |.|.:  .| :.|.|
Mouse    72 LLRISIPLDSNL--RLDKCRRFAQPQWHLLHLNGTFSNET----------EPDTE--PCVDGWVY 122

  Fly   192 ETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIF 256
            : ..|..:|..::||||||.:.|.:||:..|::|:..|.||.|:|||:||||.:|..:.:...|.
Mouse   123 D-RSNFLSTIVTEWDLVCESQALNSVAKFSFMIGLFIGAIICGHLSDRFGRKFILTCALLQFAIT 186

  Fly   257 GLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGL 321
            ...:....||.:|..||.|.|:....::.:..:|.:|:...|:..:..:.......|.|||::||
Mouse   187 ETCVAFAPSFFIYCLLRFLAGMSVEPISVNSHLLMLEWTSPKFLGMVAVLTSCAASIGYMILAGL 251

  Fly   322 AYLTQDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGR----IDEVRRIIEA-AAKFNGRQLP 381
            |:|.:.::.|||.:.:|..|...|...:.||.|||:|..:    :.|:|::... ..|.:|..|.
Mouse   252 AFLFRIWRHLQLAMSVPIFFFLILTRWMSESARWLIVTNKPQKGLKELRKVAHMNGMKNSGNTLT 316

  Fly   382 ADY-------QLTPPTQESSTQDVTYLFRSSYLRRISIC---FFCIWFTMNLVYYGIILNMSSFG 436
            .:.       :|....::||.:|   ||.:..||: .||   |....||:::  :|:.|::....
Mouse   317 MEVVEASMKNELEAAKRKSSPRD---LFHTPILRK-RICVLSFMRYLFTISI--FGLSLHLQHLS 375

  Fly   437 GNV----YLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLK 497
            .|:    :|:|||..|:.:    :..:::..:|::......:...|:....|....  .::..|:
Mouse   376 TNIILLQFLSSALGILISV----IGHFVLNHMGRRITQLVLMSLRGIFMLTAVFVP--QEMQTLR 434

  Fly   498 ITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMT 562
            |....:.....|....:..::..||.||.:|..|:|...:.....|.|.|...||.....:|...
Mouse   435 IIMATLAAALSSLCMCVSNLHINELLPTTLRATGMGVIAMFGNSGLFLAPLFMLLATYSANLPWI 499

  Fly   563 LLTAWSIFGGFVVLFLPET 581
            ....:||..||.|..||||
Mouse   500 FYGGFSILYGFSVFLLPET 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 108/408 (26%)
Slc22a30NP_795976.1 MFS_OAT 109..516 CDD:340932 112/431 (26%)

Return to query results.
Submit another query.