DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and CG3168

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_572345.1 Gene:CG3168 / 31612 FlyBaseID:FBgn0029896 Length:632 Species:Drosophila melanogaster


Alignment Length:188 Identity:46/188 - (24%)
Similarity:63/188 - (33%) Gaps:51/188 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 WTYTGRYVDLKQLPQEEVVTITKDDNDV--EFMQQGMDLSFFYRSAEWDLLSLTSERHSVLYASC 154
            |.||.|...|..|.......|..|..|.  ||:..|..|:.|...  |.|               
  Fly    93 WWYTNRRYSLASLFLVTNQLIIHDSADYFREFLADGTSLNAFIHL--WSL--------------- 140

  Fly   155 CGPEK--YVDITY-YFGLRRKTLFFTCNLILPCFLISILTT------FVFYLSDHKITFSISILV 210
             |.|.  |:.:.: :|||:     |..|.:|. .:.|.|||      |.|........|....|.
  Fly   141 -GVEMQFYLLVPFIFFGLQ-----FLKNDLLR-LIASSLTTVIGFLCFAFINQQFAFNFMFLRLW 198

  Fly   211 TLTVFFLVLI----------DLMPPT--SLVIPMFGRYLITTMILVALSTVVSVITVN 256
            ..:..|:.|.          :.:.|.  .|::|:....|.|    |.|||:...|..|
  Fly   199 QFSAGFMALFWKKISFYEYSEKLKPAKIELILPIAKGDLTT----VCLSTIALCILPN 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 20/86 (23%)
CG3168NP_572345.1 synapt_SV2 <137..626 CDD:130366 32/144 (22%)

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