DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and Slc22a13

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001119757.1 Gene:Slc22a13 / 316062 RGDID:1306840 Length:551 Species:Rattus norvegicus


Alignment Length:515 Identity:155/515 - (30%)
Similarity:263/515 - (51%) Gaps:45/515 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 MGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQ---------RPAQLQHMPVATWRN 144
            :|.:|::|:.:|:|:.:....:.|.:.|.::...::..:|.         ..:..:.:.|:...:
  Rat    11 VGDFGRFQVRLTILMGIPNFLSAFFVFSQVFMVLDEAHYCSVSWVKNHTFNLSAAEQLAVSIPND 75

  Fly   145 LSGSVDNCRRW---------EGIDWSQVSNETTLPSDWKTPAEMDKKLVACEK-WEYETNDNVGN 199
            .:|..::|..:         |.| .|...|||.                ||:. |:|.  :|...
  Rat    76 TAGRPESCLMFRPPPDNASLEDI-LSHRFNETQ----------------ACDSGWDYP--ENRPP 121

  Fly   200 TWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICS 264
            :..:::|||||:|:||..::..|:.|:..|.::.|.:.|..||:..|.:..:|..|..:.....|
  Rat   122 SLKNEFDLVCERENLKRTSQSVFMAGLLVGALVFGPVCDWIGRRPSLLMQLLLSGIASMATAFVS 186

  Fly   265 SFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYLTQDYQ 329
            |||||:|||..|...:.....|..:|..|:|....||.|.:.......:..|.::||||..::::
  Rat   187 SFELYMTLRFALATANAGFLLSSNVLLSEWVGTSRRTRAMVLAQSNFALGLMALAGLAYGVRNWR 251

  Fly   330 RLQLCIGIPGIF-LCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADY--QLTPPTQ 391
            .||: ||...|| |.|.::|:||||||||.:||.:|.:::::.||..|||.|.::.  ||. |.:
  Rat   252 LLQI-IGTTPIFLLVFYFWVLPESPRWLLSQGRTEEAKQLVQKAALVNGRPLASELLNQLV-PEK 314

  Fly   392 ESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIPAIAV 456
            ...:.:...|||...||::::....:||..:|:|||:...:..||.::||...:.|:||:||...
  Rat   315 TGPSGNALDLFRHPQLRKVTLILIAVWFVDSLLYYGLGFQVGDFGLDIYLTQVIFGVVEVPARLS 379

  Fly   457 AMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLKITFLMMGKFTISAGNTIMPVYTAE 521
            ::.::.|:|:||....||..|||.|.......|  ||..:.....::|||..||..||..|||||
  Rat   380 SIPMMEKLGRKWSQLCTLTLAGVMCVIIIFIPG--DLPTVATALAVVGKFASSAAFTISYVYTAE 442

  Fly   522 LYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFVVLFLPET 581
            |.||.||..|:|..::.:.:..|:||.:.||.:....:.|.:..:..|..|.:...||||
  Rat   443 LLPTIIRQTGMGLVSIFSRVGGIITPLVMLLEQYHKAIPMLIFGSLPIGAGLLCALLPET 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 153/512 (30%)
MFS 222..579 CDD:119392 121/359 (34%)
Slc22a13NP_001119757.1 2A0119 12..510 CDD:273328 155/514 (30%)
MFS 139..500 CDD:119392 121/364 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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