DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and CG3690

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001284764.1 Gene:CG3690 / 31047 FlyBaseID:FBgn0040350 Length:558 Species:Drosophila melanogaster


Alignment Length:678 Identity:134/678 - (19%)
Similarity:219/678 - (32%) Gaps:254/678 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SQRSRSGTIPLCIMHDSAKQSPTTSPTI--PPKQQAATPQSPAAAVSGLDPADDEDETDVIGDLM 89
            |:.|.||         ..|...|....|  ||:::||              ||.|...|..|   
  Fly     2 SEPSESG---------DPKPHKTAEHQIGDPPQKEAA--------------ADFEAAIDAAG--- 40

  Fly    90 GHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVATWRNLSGSVDNCRR 154
              :|    :..:||.:..||...   .::|:.:...:                            
  Fly    41 --FG----MFNILLLVAAVPAAM---GTVYETSTMSY---------------------------- 68

  Fly   155 WEGIDWSQVSNETTLPSDWKTPAEMDKKLVACEKWEYETNDNVGNTWTSQWDLVCEKEHLKNVAE 219
                         .|||     ||.|.||...:                           |.:..
  Fly    69 -------------ILPS-----AECDLKLSLLD---------------------------KGILN 88

  Fly   220 MFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTLRALLGLVSVSVT 284
            .....|:.:..::.|||:|..||:.:|.:.....||..|...:..| .:.|.:...||...:|..
  Fly    89 AITYAGMISSAVLWGYLADIKGRRNLLIVGYAADTICVLGGALSQS-RIQLMVFKYLGGFCMSGP 152

  Fly   285 YSGLILAIEYVDG-KWRTIAGMYNLFPLPISYMIISGLAYL----TQDYQRLQLCI--------- 335
            ::.|:..:..:.| |.|....|.......|:.:.:.|||.|    |.:.|...|.:         
  Fly   153 FAVLMTYLTELHGRKHRQRIMMMVGIMFSIATLTLPGLAMLILPETWNIQIWTLSLTSWQFFVAV 217

  Fly   336 -GIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQ-------------------- 379
             .:|.:....|:|..||||::|:.|||..|.....:.....|.|:                    
  Fly   218 TALPSLLSFVLFFFFPESPKFLMSKGRNREALDAFKFMYHLNSRKPKDSFPIKLLANEVIVPVKK 282

  Fly   380 ------LPADYQLTPPT-----QESSTQD------------VTYLFRSSYLRR---ISICFFCI- 417
                  :|.:.:|  ||     |:...||            :..||...||..   :.:..||: 
  Fly   283 HAKDETIPTELKL--PTECVEVQDPENQDSKKSSLRSGFTQLRPLFTKPYLGLSLWVYLLNFCVL 345

  Fly   418 --------WFTM----------------------NLVYYG---------------------IILN 431
                    |...                      |::.|.                     :|:.
  Fly   346 LGQNTMRLWLPQLFASINEYENLMSGESQSTSICNILEYSVNRTQSQLEAVTRNDPTVECHVIIT 410

  Fly   432 MSSFGGNVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAI--TEGHADLL 494
            .|::..|:.:  |.||.|   |..:|.:::..||.|.:..:.|:.|  |.|...:  :...|..:
  Fly   411 PSTYTNNLIV--AGAGFV---AYMLAGFLVNLVGVKLIMTSGLLIA--AGCSIGMYWSSSAASTV 468

  Fly   495 WLKITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHL 559
            .|...|:.||  :|||.:.|..  :..|:||.:|.:.|       .|.::.....|||..|....
  Fly   469 ALASLFVTMG--SISATSVISA--SVSLFPTSLRTMIV-------SLEMMFGRLGSLLGNIFFPA 522

  Fly   560 LMTL--------LTAWSIFGGFVVLFLP 579
            ||.|        ::|:.:.|.|:..|||
  Fly   523 LMGLGCVPPFLMISAFMLAGCFMAAFLP 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 118/613 (19%)
MFS 222..579 CDD:119392 101/479 (21%)
CG3690NP_001284764.1 SP 42..549 CDD:273317 115/607 (19%)
MFS 49..>195 CDD:119392 38/222 (17%)
MFS 419..>550 CDD:119392 39/148 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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