DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and Slc22a17

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_803156.2 Gene:Slc22a17 / 305886 RGDID:631405 Length:520 Species:Rattus norvegicus


Alignment Length:437 Identity:111/437 - (25%)
Similarity:179/437 - (40%) Gaps:69/437 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 CEK-WEYE-----TNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKT 244
            |.| |:|.     |.:.:|     ||||||:......:.::.|:||.|:|.:..||.:|:|||:.
  Rat    70 CLKDWDYNGLPVLTTNAIG-----QWDLVCDLGWQVILEQILFILGFASGYLFLGYPADRFGRRG 129

  Fly   245 MLFISAVLQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLF 309
            ::.::..|....|:......|....:|||.|||.:...|.....::.:|..|...|....:....
  Rat   130 IVLLTLGLVGPCGVGGAAAGSSTGIMTLRFLLGFLLAGVDLGVYLMRLELCDPTQRLRVALAGEL 194

  Fly   310 PLPISYMIISGLAYLTQDYQRLQL-----CI-----GIPGIFLCFLWFVVPESPRWLLVKGRIDE 364
            .....:.:..|||.:::|::.||.     ||     |.||:||        ||.|||:||.:|:|
  Rat   195 VGVGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFL--------ESARWLIVKRQIEE 251

  Fly   365 VRRIIEAAAKFN---GRQLPADYQ-------LTPPTQESSTQDVTYLFRSSYLRRISICFFCIWF 419
            .:.::...|:.|   |:.|..:.|       .|.|...:||.....|..   .|.|......:.|
  Rat   252 AQSVLRILAERNRPHGQMLGEEAQEALQELENTCPLPTTSTFSFASLLN---YRNIWKNLLILGF 313

  Fly   420 TMNLVYYGIILNMSSFGG-----NVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGV 479
            | |.:.:.|.......||     :.||.|.||......|.......:.:.|::.:...::...|:
  Rat   314 T-NFIAHAIRHCYQPVGGGGSPSDFYLCSLLASGTAALACVFLGVTVDRFGRRGILLLSMTLTGI 377

  Fly   480 ACCC----------AAITEGHADLLWLKITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGA 534
            |...          ||||           ||.::|.|:..|...:..:..||:.||.:|..|:|.
  Rat   378 ASLVLLGLWDYLNDAAIT-----------TFSVLGLFSSQASAILSTLLAAEVIPTTVRGRGLGL 431

  Fly   535 CNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFVVLFLPET 581
            ......|..:..|...|.......|...:|.|.::.....::.||||
  Rat   432 IMALGALGGLSCPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPET 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 109/435 (25%)
MFS 222..579 CDD:119392 95/391 (24%)
Slc22a17NP_803156.2 MFS 106..476 CDD:119392 95/392 (24%)
2A0114 111..475 CDD:273326 92/386 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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