DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and Slc22a5

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_062142.1 Gene:Slc22a5 / 29726 RGDID:3702 Length:557 Species:Rattus norvegicus


Alignment Length:569 Identity:158/569 - (27%)
Similarity:267/569 - (46%) Gaps:82/569 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 DVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVATWRNLSG 147
            |.:...:|.:|.:|.|:..|||...:||.|:..|.::.|...:..|..|..:...  :.|||.|.
  Rat     5 DEVTAFLGEWGPFQRLIFFLLSASIIPNGFNGMSIVFLAGTPEHRCLVPHTVNLS--SAWRNHSI 67

  Fly   148 SVD---------NCRRW----------------EGIDWSQVSNETTLPSDWKTPAEMDKKLVACE 187
            .::         :|||:                ..:|..|:..|..|                 :
  Rat    68 PLETKDGRQVPQSCRRYRLATIANFSALGLEPGRDVDLEQLEQENCL-----------------D 115

  Fly   188 KWEYETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVL 252
            .||| ..|...:|..::|||||:.:....:....|.:||..|..|||.|||:||||.:||::..:
  Rat   116 GWEY-NKDVFLSTIVTEWDLVCKDDWKAPLTTSLFFVGVLMGSFISGQLSDRFGRKNVLFLTMGM 179

  Fly   253 QTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYN--LFPLPISY 315
            ||.|........:||::..|..|:|:..:|...:..:|..|.:....|.|.....  :| ....:
  Rat   180 QTGFSFLQLFSVNFEMFTVLFVLVGMGQISNYVAAFVLGTEILSKSIRIIFATLGVCIF-YAFGF 243

  Fly   316 MIISGLAYLTQDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQL 380
            |::...||..:|::.|.|.:.:||:....||:.:|||||||:.:||:.|...||..||||||...
  Rat   244 MVLPLFAYFIRDWRMLLLALTVPGVLCGALWWFIPESPRWLISQGRVKEAEVIIRKAAKFNGIVA 308

  Fly   381 PADYQLTPPTQ-------ESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGN 438
            |:  .:..|::       :..:..:..|.|:..:|.|:|....:|.|:::.|:|:.|:..:..|:
  Rat   309 PS--TIFDPSELQDLNSKKPQSHHIYDLVRTRNIRIITIMSIILWLTISVGYFGLSLDTPNLHGD 371

  Fly   439 VYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLKITFLMM 503
            :|:|..|...||:||..:|..::..:.:::...|.|...|.......:..  ::|.:|....:|:
  Rat   372 IYVNCFLLAAVEVPAYVLAWLLLQHLPRRYSISAALFLGGSVLLFIQLVP--SELFYLSTALVMV 434

  Fly   504 GKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWS 568
            |||.|::..:::.|||||||||.:||:|||..:.|:.|..||:||...|...:..|...|:.:.:
  Rat   435 GKFGITSAYSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYFVYLGAYDRFLPYILMGSLT 499

  Fly   569 IFGGFVVLFLPET----------------AVRQ-------KTDNQGGSS 594
            |....:.||.||:                .::|       :|...||.|
  Rat   500 ILTAILTLFFPESFGAPLPDTIDQMLRVKGIKQWQIQSQTRTQKDGGES 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 151/524 (29%)
MFS 222..579 CDD:119392 115/365 (32%)
Slc22a5NP_062142.1 2A0119 12..520 CDD:273328 152/532 (29%)
MFS 123..510 CDD:119392 121/391 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 537..557 4/12 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.010

Return to query results.
Submit another query.