DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and Slc22a3

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_062103.1 Gene:Slc22a3 / 29504 RGDID:3701 Length:551 Species:Rattus norvegicus


Alignment Length:563 Identity:151/563 - (26%)
Similarity:257/563 - (45%) Gaps:82/563 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 GHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKD-FWCQRPAQLQHMPVATWRNLSGSVDNCR 153
            |.:|::|..:.:||.|..|...|.....::..:..| :||:.|            ..:...:.|.
  Rat    12 GEFGRFQRRVFLLLCLTGVTFAFLFVGVVFLGSQPDYYWCRGP------------RATALAERCA 64

  Fly   154 RWEGIDWSQVSNETTLPS--------------DWKTPAEM-----------DKKLVACE-KWEY- 191
            .....:|:..:.|..:|:              |..|.:|:           ...||.|. .|.| 
  Rat    65 WSPEEEWNLTTPELHVPAERRGQGHCHRYLLEDTNTSSELSCDPLAAFPNRSAPLVPCSGDWRYV 129

  Fly   192 ETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIF 256
            ||:    :|..||:||||....:.::.:....||...|....||.:|::||..:..||.....|.
  Rat   130 ETH----STIVSQFDLVCGNAWMLDLTQAILNLGFLAGAFTLGYAADRYGRLIVYLISCFGVGIT 190

  Fly   257 GLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGL 321
            |:.:....:|.:::..|.|.|:.......:..::..|.|..|.|.|.|:.......:..:|:.|:
  Rat   191 GVVVAFAPNFSVFVIFRFLQGVFGKGAWMTCFVIVTEIVGSKQRRIVGIVIQMFFTLGIIILPGI 255

  Fly   322 AYLTQDYQRLQLCIGIPG-IFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADY- 384
            ||.|..:|.:||.|.:|. :||.:.| |||||||||:.:.:.::..:|:...||.||:.|.::| 
  Rat   256 AYFTPSWQGIQLAISLPSFLFLLYYW-VVPESPRWLITRKQGEKALQILRRVAKCNGKHLSSNYS 319

  Fly   385 QLTPPTQESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLV 449
            ::|...:|.|......|.|:..:|:.::.....|||..:||.|:::.:...|||:|::..::|||
  Rat   320 EITVTDEEVSNPSCLDLVRTPQMRKCTLILMFAWFTSAVVYQGLVMRLGLIGGNLYMDFFISGLV 384

  Fly   450 EIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAA-ITEGHADLLWLKITFLMMGKFTISAGNT 513
            |:|...:.:..|.::|::..|.|:.|.|||:|...| :.||   :.||:.|...:|:..|:....
  Rat   385 ELPGALLILLTIERLGRRLPFAASNIVAGVSCLVTAFLPEG---IPWLRTTVATLGRLGITMAFE 446

  Fly   514 IMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAW----------- 567
            |:.:..:|||||.:||.||..|:.......|:.|:          ||..|...|           
  Rat   447 IVYLVNSELYPTTLRNFGVSLCSGLCDFGGIIAPF----------LLFRLAAIWLELPLIIFGIL 501

  Fly   568 -SIFGGFVVLF-------LPETAVRQKTDNQGGSSANASAAKQ 602
             |:.||.|:|.       ||||.  :..:..|.|..:....|:
  Rat   502 ASVCGGLVMLLPETKGIALPETV--EDVEKLGSSQLHQCGRKK 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 146/540 (27%)
MFS 222..579 CDD:119392 111/378 (29%)
Slc22a3NP_062103.1 2A0119 12..523 CDD:273328 146/540 (27%)
MFS 145..513 CDD:119392 111/381 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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