DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and SPAPB1E7.08c

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_594134.1 Gene:SPAPB1E7.08c / 2543660 PomBaseID:SPAPB1E7.08c Length:554 Species:Schizosaccharomyces pombe


Alignment Length:457 Identity:96/457 - (21%)
Similarity:156/457 - (34%) Gaps:141/457 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 LGVATGGIISGYLSDKFGRK-----TMLFISAVLQTIFG-------------LWLY--------- 261
            ||:..|.::....:|..||:     |.|| :.|...|.|             ||.:         
pombe   129 LGLLVGAMVWSLSADTIGRRWAFNLTFLF-TGVFAVIAGASPNFASICVFDALWSFGVGGNLPVD 192

  Fly   262 -------ICSSFELYLTLRAL---LGLVSVSVTYSGLILAIEYVDGK----------WRTIAGMY 306
                   :.||.:..||:.:.   :|.|..::...|||......|.:          ||     |
pombe   193 SAIFLEALPSSHQWLLTVMSFWWAIGQVIANLVSWGLISNFSCPDDESVCHRADNKGWR-----Y 252

  Fly   307 NLFPLPISYMIISGLAYLTQDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRI--I 369
            .||.:....:::....:|...|                      |||::.|.||  |:.:.:  |
pombe   253 FLFTMGGMTLLMFAARFLVSVY----------------------ESPKFYLAKG--DDYKAVETI 293

  Fly   370 EAAAKFNGRQLPAD----YQLTPPTQESS-------------TQDVTYL---------------- 401
            ...|:.||:.....    |.:....||.|             ||..|.|                
pombe   294 HKIARINGKTCTLTVEELYAIDRQEQEESDLDDSKSSDAKSVTQGTTNLIVEKLRKYNFEHIRQC 358

  Fly   402 FRSSYLRRISICFFCIWFTMNLVY--YGIIL----------NMSSFGGNVYLNSALAGLVEIPAI 454
            |.|..|...||.....|..:.|.:  |...|          |........|.||.:...:.:|..
pombe   359 FGSRKLAISSILVILSWAVIGLAFPLYNAFLPYYLETRGNANEPLSVAKTYRNSLIVSAIGVPGS 423

  Fly   455 AVAMYIIT-KVGKKWLFCATLICAGVACCCAAITE-GHADLLWLKITF-----LMMGKFTISAGN 512
            .:|..::. ::|:|...|.:||..||....:...: .:|.|.| ..||     :|.|        
pombe   424 LIAGVLVEFRIGRKGTLCLSLILTGVFLFASTTAKTSNAYLGW-NCTFSFFSDIMYG-------- 479

  Fly   513 TIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFVVLF 577
             ::..||.|::|:.:|...||....|..:..|.:|.:::...:.....:.:..|..||.|.:|:|
pombe   480 -VLYAYTPEVFPSKVRGTAVGLAASANRILGIFSPVIAMRANLTTSAPIFVSGALFIFAGILVVF 543

  Fly   578 LP 579
            .|
pombe   544 FP 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 96/457 (21%)
MFS 222..579 CDD:119392 95/455 (21%)
SPAPB1E7.08cNP_594134.1 2A0109 68..552 CDD:129965 96/457 (21%)
MFS 122..545 CDD:119392 95/455 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 79 1.000 Domainoid score I2349
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 86 1.000 Inparanoid score I1789
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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