DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and pho841

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_595057.1 Gene:pho841 / 2540085 PomBaseID:SPBC1683.01 Length:573 Species:Schizosaccharomyces pombe


Alignment Length:500 Identity:106/500 - (21%)
Similarity:186/500 - (37%) Gaps:193/500 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 NVAEMFFLLGVATGGIISGYLSDKFGRK-------------TMLFISAVLQTIFG-----LWLYI 262
            |:..:|       |.::.|::.|.||||             |:|.| |:.::|..     :|:: 
pombe   103 NIGNIF-------GQLMFGFMGDFFGRKFVYGKEMIIVIIATILLI-AMPKSIHSPLSKMMWVF- 158

  Fly   263 CSSFELYLTLRALLGL-------VSVSVTYS-------GLILAIEYVDGKWRTIAG------MYN 307
            |        .|.|||:       :|.::|..       |.::::.:....:.|:||      :..
pombe   159 C--------WRWLLGVGIGGDYPMSAAITSERSKLNRRGTLISLIFAFQGFGTLAGAIVTIILLG 215

  Fly   308 LFPLPIS----YMIISGLAYLTQDYQRLQLCIG-IPGIFLCFLWFVVPESPRWLLVKGRIDEVRR 367
            .|..|::    |..:.|:       .|||..:. :|.|.:     ::|               |.
pombe   216 CFEHPLNREGHYRKLEGV-------WRLQFGLALVPAIGV-----LIP---------------RL 253

  Fly   368 IIEAAAKF-NGRQLPADYQLTPPTQESSTQD-------VT------------YLFRSS------- 405
            ::|...|| |.:||.:.....|.|..:...|       ||            ||.||:       
pombe   254 MMEETQKFKNSQQLNSGDNRDPKTSLNFEDDELVKNPSVTKGHPEIHESSENYLSRSNTVENEPE 318

  Fly   406 --------------------YLRR---------ISICFFCIWFTMNLVYYGIILNMS-------- 433
                                |.|:         .|:|    ||.:::.:||:.||.|        
pombe   319 NIEKQFESVSAPANRSGFIQYFRQWHHFKHLLGTSVC----WFLLDIAFYGVNLNQSVILKNIGF 379

  Fly   434 SFGGNVY---LNSALAGLVEIPAIAVAMYI---------ITKVGKKWLFCATLICAGVACCCAAI 486
            |.|.|.|   :.:|:..|:    ||||.|:         :..:|:||:.....:..|:   ..||
pombe   380 SSGTNEYRTLMKNAIGNLI----IAVAGYVPGYWFNVFLVEILGRKWIQLQGFVITGL---MFAI 437

  Fly   487 TEGHADLLWLKIT-------FLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGL--- 541
            ..|.    |.:|:       |::...|:....|:...:|.||::|..:|....|   ::|.|   
pombe   438 LAGR----WNEISTGGRFACFVIAQLFSNFGPNSTTFIYPAEVFPARVRGTAHG---ISAALGKC 495

  Fly   542 -ALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFV-VLFLPETAVR 584
             |::.:...:.|..|.|:..:..:....::||.: .|.||||..|
pombe   496 GAILASLLFNFLTSIIGYGNVMWIFCGCMWGGILFTLLLPETKGR 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 101/493 (20%)
pho841NP_595057.1 2A0109 27..547 CDD:129965 105/499 (21%)

Return to query results.
Submit another query.