DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and Slc22a2

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_038695.1 Gene:Slc22a2 / 20518 MGIID:1335072 Length:553 Species:Mus musculus


Alignment Length:538 Identity:149/538 - (27%)
Similarity:262/538 - (48%) Gaps:65/538 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 IGDLMGHYGKWQL-------LMTVLLSLFQ-----------VPNTFHISSSIYQAANKDFWCQRP 131
            :.|::.|.|::.|       |:.:|...|.           .||....|..:.:.:.:..|  .|
Mouse     4 VDDILEHIGEFHLFQKQTFFLLALLSGAFTPIYVGIVFLGFTPNHHCRSPGVAELSQRCGW--SP 66

  Fly   132 AQLQHMPVATWRNLSGSV---DNCRRWEGIDWSQ------------VSNETTLPSDWKTPAEMDK 181
            |:..:..|....: :|.|   ..|.|:| :||:|            .:|.:.||           
Mouse    67 AEELNYTVPGLGS-AGEVSFLSQCMRYE-VDWNQSTLDCVDPLSSLAANRSHLP----------- 118

  Fly   182 KLVACEK-WEYETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTM 245
             |..||. |.|:|   .|::..::::|||....:.::.:....:|...|.:..|||:|:||||..
Mouse   119 -LSPCEHGWVYDT---PGSSIVTEFNLVCAHSWMLDLFQSLVNVGFFIGAVGIGYLADRFGRKFC 179

  Fly   246 LFISAVLQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFP 310
            |.::.::..|.|:.:.|..::...|..|.|.||||.:....|.||..|:|...:|...|:.....
Mouse   180 LLVTILINAISGVLMAISPNYAWMLVFRFLQGLVSKAGWLIGYILITEFVGLGYRRTVGICYQIA 244

  Fly   311 LPISYMIISGLAYLTQDYQRLQLCIGIPGI-FLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAK 374
            ..:..:|::|:||...:::.||..:.:|.. ||.:.| .:|||||||:.:.:..:..:||:..||
Mouse   245 FTVGLLILAGVAYALPNWRWLQFAVTLPNFCFLLYFW-CIPESPRWLISQNKNAKAMKIIKHIAK 308

  Fly   375 FNGRQLPADYQ-LTPPTQESSTQDVTY--LFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFG 436
            .||:.:|...| ||.........:.::  |.|:..:|:.::.....|||.:::|.|:|::|...|
Mouse   309 KNGKSVPVSLQSLTADEDTGMKLNPSFLDLVRTPQIRKHTLILMYNWFTSSVLYQGLIMHMGLAG 373

  Fly   437 GNVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLKITFL 501
            .|:||:...:.|||.||..:.:..|.::|:::.:..:.:.||.||..:.....  ||.|||||..
Mouse   374 DNIYLDFFYSALVEFPAAFIIILTIDRIGRRYPWAVSNMVAGAACLASVFIPD--DLQWLKITVA 436

  Fly   502 MMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTA 566
            .:|:..|:....::.:..||||||.|||:.|..|:....:..|:||:  |:.::....|...|..
Mouse   437 CLGRMGITIAYEMVCLVNAELYPTYIRNLAVLVCSSMCDIGGIVTPF--LVYRLTDIWLEFPLVV 499

  Fly   567 WSIFG---GFVVLFLPET 581
            :::.|   |.:||.||||
Mouse   500 FAVVGLVAGGLVLLLPET 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 146/531 (27%)
MFS 222..579 CDD:119392 110/363 (30%)
Slc22a2NP_038695.1 2A0119 12..525 CDD:273328 147/530 (28%)
MFS 125..492 CDD:119392 111/374 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

Return to query results.
Submit another query.