DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and Slc22a1

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_033228.2 Gene:Slc22a1 / 20517 MGIID:108111 Length:556 Species:Mus musculus


Alignment Length:571 Identity:156/571 - (27%)
Similarity:264/571 - (46%) Gaps:81/571 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 EDETDVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVATWR 143
            :|..:.:|: .|.:.|...|:..|:|....|....|   ::.....|..|:.|...:......|.
Mouse     5 DDVLEHVGE-FGWFQKQAFLLLCLISASLAPIYVGI---VFLGFTPDHHCRSPGVAELSQRCGWS 65

  Fly   144 NLS---------GS------VDNCRRWEGIDWSQ------------VSNETTLPSDWKTPAEMDK 181
            ...         ||      :..|.::| :||:|            .:|.:.||           
Mouse    66 PAEELNYTVPGLGSAGEASFLSQCMKYE-VDWNQSTLDCVDPLSSLAANRSHLP----------- 118

  Fly   182 KLVACEK-WEYETNDNVGNTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTM 245
             |..||. |.|:|   .|::..::::|||......::.:....||...|.::.||::|:||||..
Mouse   119 -LSPCEHGWVYDT---PGSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLC 179

  Fly   246 LFISAVLQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYV-DGKWRTIAGMYNLF 309
            |.::.::.::.|:...:...:...|..|.|.|:||.....||..|..|:| .|..||.|.:|.: 
Mouse   180 LLVTTLVTSLSGVLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQV- 243

  Fly   310 PLPISYMIISGLAYLTQDYQRLQLCIGIPG-IFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAA 373
            ...:..:.::|:||...|::.|||.:.:|. :||.:.|| |||||||||.:.|..:..||:|..|
Mouse   244 AFTVGLVGLAGVAYAIPDWRWLQLAVSLPTFLFLLYYWF-VPESPRWLLSQKRTTQAVRIMEQIA 307

  Fly   374 KFNGRQLPADYQ---LTPPTQESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSF 435
            :.|.:..|||.:   |.....|..:.....|||:..||:.::....:||:..::|.|:|:::.:.
Mouse   308 QKNRKVPPADLKMMCLEEDASERRSPSFADLFRTPSLRKHTLILMYLWFSCAVLYQGLIMHVGAT 372

  Fly   436 GGNVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLKITF 500
            |.|:||:...:.|||.||..:.:..|.::|:.:...|:.:.|| |.|...|...| :|.||.:|.
Mouse   373 GANLYLDFFYSSLVEFPAAFIILVTIDRIGRIYPIAASNLVAG-AACLLMIFIPH-ELHWLNVTL 435

  Fly   501 LMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLT 565
            ..:|:...:....::.:..||||||.|||:|:..|:....|..|.||:          ::..|:.
Mouse   436 ACLGRMGATIVLQMVCLVNAELYPTFIRNLGMMVCSALCDLGGIFTPF----------MVFRLME 490

  Fly   566 AWS-----IFG------GFVVLFLPET---AVRQKTDNQGGSSANASAAKQ 602
            .|.     :||      |.|.|.||||   |:.:..:.........|.||:
Mouse   491 VWQALPLILFGVLGLSAGAVTLLLPETKGVALPETIEEAENLGRRKSKAKE 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 148/534 (28%)
MFS 222..579 CDD:119392 115/372 (31%)
Slc22a1NP_033228.2 2A0119 12..525 CDD:273328 152/546 (28%)
MFS 125..515 CDD:119392 122/406 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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