DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and Y57G11C.23

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_502801.2 Gene:Y57G11C.23 / 190377 WormBaseID:WBGene00013318 Length:529 Species:Caenorhabditis elegans


Alignment Length:468 Identity:101/468 - (21%)
Similarity:184/468 - (39%) Gaps:100/468 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 DWSQVSNETTLPSDWKTPAEMDKKLVACEKWEYETNDNVGNTWTSQWDLVCEKEHLKNVAEMFF- 222
            |:.:.|:....|.   .....|:.:||..|.::         :::|::...:...||     :| 
 Worm    58 DFDRHSDSDVCPF---ASTNFDQCVVAANKTDF---------YSAQYEYQQDCTGLK-----YFS 105

  Fly   223 -----LLGVATGGIISGYLSDKFGRKTM-----------LFISAVLQTIFGLWLYICSSFELYLT 271
                 .||...|.:|.|||||..||:.:           :.:||.|..:...:::      .:|.
 Worm   106 SSTSTFLGTLVGNLILGYLSDTIGRRPVYIFSILLGVPSVILSAALNDVMSFYIF------RFLV 164

  Fly   272 LRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYLTQDYQRLQ-LCI 335
            ..|:.|.::|..||:. .:.|.....:.||.....|      :.|:..|:::|..:::... ||.
 Worm   165 GFAIAGTLTVGWTYAS-EMVIPSRRFRLRTFPNWAN------ARMMQVGVSWLAGEWRLASYLCA 222

  Fly   336 GIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADYQLTPPTQESSTQDV-- 398
            .:....|..:|: :||||.:|..|.:.....|..|..|..    ...:|:   |......||:  
 Worm   223 ALSATVLPMIWY-LPESPVFLEQKKKYKRAERSREKIAGI----CQLEYE---PKAREEMQDLKK 279

  Fly   399 ---TYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLV-EIPAIAVAMY 459
               ..|.:|..||...:....:||.:.:..|...||......|.|:...|.||| .:..|.:.:.
 Worm   280 ITPIKLLKSPVLRTNFLVLCWMWFYVGMSVYITDLNSGDMAENFYVGQFLCGLVLTVSKIMIGIL 344

  Fly   460 --IITKVGKKWLFCATLICAGVA--CCCAAITEGHADLLWLKITFLMMGKFTISAGNTI----MP 516
              .|..:|::.||.::.|.|.:|  ....|:...:....|..:.:::     ..||.::    ..
 Worm   345 EPKIPWLGRRCLFISSQIIAILAYITILTALWTRNKVSWWYTVAYIL-----AYAGQSLCLETCY 404

  Fly   517 VYTAELYPTPIRNVGVGACNVAAGLALILT-----------PYLSLLNKIEGHLLMTLLTAWSIF 570
            :..|||.||.:|.:.....|:...:..||.           |.|.::|.|       :.|     
 Worm   405 LSLAELMPTDVRTISGALMNILMKIGTILASTTKPIKFWYEPLLFIINTI-------ICT----- 457

  Fly   571 GGFVVL--FLPET 581
            ||.:::  :|||:
 Worm   458 GGLIIVWKYLPES 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 100/466 (21%)
MFS 222..579 CDD:119392 88/401 (22%)
Y57G11C.23NP_502801.2 2A0119 <107..473 CDD:273328 90/402 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.