DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and F45E10.2

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001022174.1 Gene:F45E10.2 / 185801 WormBaseID:WBGene00009729 Length:538 Species:Caenorhabditis elegans


Alignment Length:544 Identity:128/544 - (23%)
Similarity:254/544 - (46%) Gaps:94/544 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 VSGLDPADDEDETDVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQL 134
            |..:|..:|:.:.:.|.:.:|.:|::|.:..:|:.:                         |...
 Worm    56 VEEVDVRNDKIKLESIFEGLGSFGRFQQIQFILICI-------------------------PIAF 95

  Fly   135 QHMPVATWRNLSGSVDNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVACEKWEYETNDNVGN 199
            ..|.|.:|..:   |...|:        :.|||.           :.::..||:..|..:|    
 Worm    96 VSMHVMSWTFV---VSPARK--------ICNETN-----------ETRIDGCEELAYSASD---- 134

  Fly   200 TWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICS 264
                :|::..:...::...:..:.:|...|....|.::||.|||.:||...|||.:..|.|.:..
 Worm   135 ----RWEMDGDNGWIRATVQAVYFIGQMIGSFTCGVMADKIGRKKVLFWCLVLQVVCALLLIVAP 195

  Fly   265 SFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRT-IAGMYNLFPLPISYMIISGLAYLTQDY 328
            ::.:|..|:|..|.....:....::|.||.|..|:|: ||.:.|:|.: |..::::.:||...||
 Worm   196 TWWIYAILKAGTGFTQPGIYGVAVVLGIELVGKKYRSFIAVIANVFGV-IGGVLLAVMAYFIVDY 259

  Fly   329 QRLQLCIGIPG-IFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADY-------- 384
            :.|...|.||. ||:.:.| ::.||.|||:.:.:.|:...::.|.|.:|.:.:|.::        
 Worm   260 RLLHASIAIPSLIFITYYW-MIHESARWLVSQEKYDDANVVLCATANWNKKTIPKNWAEKIEKKM 323

  Fly   385 QLTPPTQESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLV 449
            .:| .|::..:..|..|.|:..:|:.:|..|.:|....::|||:.:.....||::::....:.|:
 Worm   324 DVT-ATKKKDSFGVFDLIRTPQMRKRTIANFVMWPVTTMMYYGLTMRSDVGGGSLFVTFVTSQLM 387

  Fly   450 EIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLL--WLKITFLMMGKFTISAGN 512
            |:||:.:...:|.::|::.::...:..||:....:.:|.   ||:  ...:..||:.|..:|...
 Worm   388 ELPAVIIVALLIDRLGRRIMYSGAIFTAGMLLLASWLTH---DLIPSQYAVIMLMVAKGAVSVAY 449

  Fly   513 TIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLS--LLNKIEGHLLMTL----------LT 565
            |:|..||:||:||.|||..||.|:..|....|...:::  |:::. |.::|.:          :.
 Worm   450 TVMYTYTSELFPTVIRNTAVGCCSTIARFGAISASFIAFFLVDRF-GRIVMIIPFTILALCASIV 513

  Fly   566 AWSIFGGFVVLFLPETAVRQKTDN 589
            :|::        ||||..:|..|:
 Worm   514 SWTM--------LPETVNQQLPDS 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 120/514 (23%)
MFS 222..579 CDD:119392 100/380 (26%)
F45E10.2NP_001022174.1 MFS_SLC22 121..518 CDD:340875 105/419 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.