DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and Slc22a6

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_032792.2 Gene:Slc22a6 / 18399 MGIID:892001 Length:545 Species:Mus musculus


Alignment Length:512 Identity:127/512 - (24%)
Similarity:238/512 - (46%) Gaps:39/512 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 MGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQL---QHMPVATWRNL--SGS 148
            :|..|::||:...::....:....|.:...:.||.....|:.||..   :...:..|..|  .|.
Mouse    10 VGGVGRFQLIQVTMVVAPLLLMASHNTLQNFTAAIPAHHCRPPANANLSKDGGLEAWLPLDKQGR 74

  Fly   149 VDNCRRWEGIDWSQVSNET--TLPSDWKTPAEMDKKLVACEKWEYETNDNVGNTWTSQWDLVCEK 211
            .::|.|:........:|.|  |.|              ..:.|.|: |....:|..::|:|||..
Mouse    75 PESCLRFPFPHNGTEANGTGVTEP--------------CLDGWVYD-NSTFPSTIVTEWNLVCSH 124

  Fly   212 EHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTLRALL 276
            ...:.:|:..|::||..|.::.|||:|:.||:.:|.::.:...:.|.......::.:|...|.|.
Mouse   125 RAFRQLAQSLFMVGVLLGAMMFGYLADRLGRRKVLILNYLQTAVSGTCAAYAPNYTVYCIFRLLS 189

  Fly   277 GLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYLTQDYQRLQLCIGIPGIF 341
            |:...|:..:.:.|.:|::....|...|....:...:...:::|:||....::.|||.:.:| .|
Mouse   190 GMSLASIAINCMTLNMEWMPIHTRAYVGTLIGYVYSLGQFLLAGIAYAVPHWRHLQLAVSVP-FF 253

  Fly   342 LCFL--WFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADYQLTPPTQESSTQDVTY---- 400
            :.|:  ||.: ||.||....||:|...|.::..|:.||:|...........|.|..:::|.    
Mouse   254 VAFIYSWFFI-ESARWYSSSGRLDLTLRALQRVARINGKQEEGAKLSIEVLQTSLQKELTLNKGQ 317

  Fly   401 -----LFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIPAIAVAMYI 460
                 |.|...|||:.:|...:||..:..|||:::::..||.::||...:.|.|::||..|...:
Mouse   318 ASAMELLRCPTLRRLFLCLSMLWFATSFAYYGLVMDLQGFGVSMYLIQVIFGAVDLPAKFVCFLV 382

  Fly   461 ITKVGKKWLFCATLICAGVACCC-AAITEGHADLLWLKITFLMMGKFTISAGNTIMPVYTAELYP 524
            |..:|::....|:|:.||:.... ..|..||.   .::.:..::||..:::....:.:||.||||
Mouse   383 INSMGRRPAQLASLLLAGICILVNGIIPRGHT---IIRTSLAVLGKGCLASSFNCIFLYTGELYP 444

  Fly   525 TPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFVVLFLPET 581
            |.||..|:|..:..|.:..|::|.:|:..:....:.:.:..|..:....|...||||
Mouse   445 TMIRQTGLGMGSTMARVGSIVSPLISMTAEFYPSIPLFIFGAVPVAASAVTALLPET 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 125/509 (25%)
MFS 222..579 CDD:119392 95/368 (26%)
Slc22a6NP_032792.2 2A0119 11..509 CDD:273328 127/511 (25%)
MFS 129..499 CDD:119392 96/374 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 515..545
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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