DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and suex-2

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_501556.2 Gene:suex-2 / 183742 WormBaseID:WBGene00008271 Length:502 Species:Caenorhabditis elegans


Alignment Length:558 Identity:128/558 - (22%)
Similarity:219/558 - (39%) Gaps:142/558 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 GKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVATWRNLSGSVDNCRRWEG 157
            |.|:|.:||:: |:|:  |...|:.:......||                               
 Worm     3 GSWRLDITVMV-LYQI--TLIFSAQLIFVIFLDF------------------------------- 33

  Fly   158 IDWSQVSNETTLPSDWKTPAEMDKKLVACEKWEYETN-DNVGNTWTSQWDLVCEKEHLKNVAEMF 221
                       :||.:.|......||.:....:|:.| .|:.....::....|..:|    :.:|
 Worm    34 -----------MPSTYCTDDNFCYKLQSKCLMDYDHNAQNLCPVNMTENASKCIADH----SRLF 83

  Fly   222 F-----------------------LLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYIC 263
            |                       .:|...|.|..|:|:||:||:| :::|::|   ||:...:.
 Worm    84 FRSAQFEYQQDCTGLNGFSLSTATFIGTLLGNIALGFLADKYGRRT-IYLSSLL---FGIPCVVL 144

  Fly   264 SS-----FELYLTLRALLGLVSVSVTYS-GLILAIEYVDGKWR-TIAGMYNLFPLPISYMIISGL 321
            |:     :..|: .|.|:| :|||.|.: |...|.|.:....| .|....|   .|.:.||..||
 Worm   145 SAAITNIYSFYI-FRILIG-ISVSGTLTVGWTYATEMISPNRRLRILAFSN---WPNARMIQVGL 204

  Fly   322 AYLTQDYQ-RLQLCIGIPGIFLCFLWFVVPESPRWLLVKGR---IDEVRRIIEAAAKFNGRQ--- 379
            ||::|::: ...:|..:..:.|..|.: :||||.||..|.:   ..:.|:.:....||...:   
 Worm   205 AYISQEWKTATYICAAVSCLSLPILIY-LPESPIWLDQKQKYKNASKARKRLRKIGKFYSNEHST 268

  Fly   380 LPADYQLTPPTQESSTQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSA 444
            :.|:.:.||          |.:.:...||........::|.:.|..|...||.:....|:||...
 Worm   269 VVANRKFTP----------TRILKDPKLRNSFFMIIFMYFYVGLAVYITDLNGADMTKNLYLGQF 323

  Fly   445 LAGLVEIPAIAVAMYII-------TKVGKKWLFCATLICAGVACCCAAITEGHADLLWL--KITF 500
            |:|||    :::|.:||       |.:|::.||......|.:...|..|      .|:|  |.:|
 Worm   324 LSGLV----LSIAQFIIGMTEPYLTGLGRRVLFLIAQFIAMLCYICILI------CLYLNWKGSF 378

  Fly   501 LMMGKFTISAGNTIMPVYTA-----ELYPTPIRNVGVGACNVAAGLALILTPYLSLLN-KIEGHL 559
            |.:..:|::.....:.:..|     ||.||.:|.......|:...:..||......|. ..|..|
 Worm   379 LYLSAYTLAYATQSLCLEAAYLSLVELMPTDVRATAGSTANICMKIGTILATLTKPLKFAYEPSL 443

  Fly   560 LMTLLTAWSIFGGFVVLF--LPET------AVRQKTDN 589
            ....|:..:|  |.:::|  |.|:      .:.|..||
 Worm   444 FFINLSICTI--GMILVFFKLEESREADMKMIGQTNDN 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 124/542 (23%)
MFS 222..579 CDD:119392 101/410 (25%)
suex-2NP_501556.2 MFS 108..460 CDD:391944 99/383 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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