DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and C06H5.6

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_507509.3 Gene:C06H5.6 / 180170 WormBaseID:WBGene00007394 Length:556 Species:Caenorhabditis elegans


Alignment Length:516 Identity:124/516 - (24%)
Similarity:222/516 - (43%) Gaps:50/516 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ETDVIGDLMGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANK--DFWCQRPAQLQHMPVATWR 143
            :.|.:....|.||::|:|..|:.:  .|...|.::..|.....|  :|.|..| ..:.:..|.:.
 Worm    26 DADKVLTAFGKYGRYQMLAYVITT--SVHMLFALNMMIMPFITKSVEFLCDLP-DPESIDSAHFS 87

  Fly   144 NLSGSVDNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVACEKWEYETNDNVGNTWTSQWDLV 208
            .|.|  |:|..                .|.:....:|...|....:.|..:..  :|.||.:|||
 Worm    88 PLVG--DSCHL----------------QDTQLNITIDCLAVNGASYNYLADKK--STITSDFDLV 132

  Fly   209 CEKEHLKNVAEMFFLLGVATGGIISGY---LSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYL 270
            ||.:.:...|...||:|   |.|:|.:   |||..||:.:..|...:.....|......::.::|
 Worm   133 CEYQGMAEHATSIFLVG---GMIVSPFVSQLSDILGRRPLFLIPLYISVAANLICAAAPNYLIFL 194

  Fly   271 TLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYL-TQDYQRLQLC 334
            ..|.:.|:.:.|.:.:|.:|.:|.|..::|::..:.........|| ::|:.|: .::::.|...
 Worm   195 LFRFISGVATTSFSMTGFVLCMESVSLEFRSLIPVLTTISWVGGYM-LAGVFYVFFKNWRVLYFA 258

  Fly   335 IGIPGIF-LCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLP-ADYQLTPPTQESSTQD 397
            ..:||:. :.|.|| .|||..||:.|....::::.|..:..||.:.:. .|.:.......:....
 Worm   259 ASVPGLLTIPFFWF-TPESLHWLMTKQNDRKIKKYINESVAFNKQTISLIDCRNIQTVDNAPATT 322

  Fly   398 VTYLFRSSYLRRISI-----CFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIPAIAVA 457
            .|..||:.:..:|.:     .|..|  .|:..|:.:.|..:....:......|:||||:||..::
 Worm   323 KTRTFRALFYPKIFVHVVINSFILI--VMSGTYWALSLYSTELSEDETTGYFLSGLVELPAGFLS 385

  Fly   458 MYIITKVGKKWLFCATLICAGVACCCAAI--TEGHADLLWLKITFLMMGKFTISAGNTIMPVYTA 520
            ::::....:|.:...:|....|...|...  .:|:     .|:.|.::.|.|.|......|:..:
 Worm   386 VFLLIAFKRKTVSFYSLAFTAVFMLCTVYIPMQGN-----YKMIFPLLAKSTNSIVWASQPLLYS 445

  Fly   521 ELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFVVLFLPET 581
            |..||.||||..|..:....|..|..||::.|..|.......|::..||...|:||..|||
 Worm   446 EATPTTIRNVFSGVVSFVGELGSIGAPYMNRLTAINQDAPAILISIMSIVAAFLVLLQPET 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 121/505 (24%)
MFS 222..579 CDD:119392 89/369 (24%)
C06H5.6NP_507509.3 MFS_SLC22 115..504 CDD:340875 99/402 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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