DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and F17C11.12

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_505789.1 Gene:F17C11.12 / 179514 WormBaseID:WBGene00008923 Length:540 Species:Caenorhabditis elegans


Alignment Length:425 Identity:108/425 - (25%)
Similarity:188/425 - (44%) Gaps:65/425 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 TSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSF 266
            |.|:.|:||...|:.:.....:|||..|.::.|.:.|::||||.:.....:..|||:...:.:.|
 Worm   110 TEQFKLLCEDAKLEKLGTSIQMLGVMLGCVVFGQIGDQYGRKTPMMFCLCMCFIFGIMSALSADF 174

  Fly   267 ELYLTLRALL-----GLVSVSVTYSGLILAIEYVDGKWR-TIAGMYNLFPLPISYMIISGLAYLT 325
            :.:...|.:|     |..::||.|     .||.:..:.| .|:.:.:..|   :.:::..||:..
 Worm   175 KKFTIFRTILCFFNGGQSTISVVY-----MIENIPKRTRGYISTLISYSP---NVILLGILAFFF 231

  Fly   326 QDYQRLQLCIG---IPG-IFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPA---- 382
            |.:.||.|.|.   :|. |.|.||    .||||||:.||:|...:::..|..||:|  :||    
 Worm   232 QQWDRLALVISFLTVPAIIMLAFL----HESPRWLMQKGQISHAKKVFLAIEKFDG--VPAAKSL 290

  Fly   383 -------------DYQLTPPTQESSTQ-DVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMS 433
                         |.|:.....|...| ...:||::..:...:......:|...|:.|.|:.|:.
 Worm   291 NETELENFLENEHDKQVADGNTEVGKQHSFWHLFKTKEIMTGTFVIAFTFFATTLINYSIMFNLG 355

  Fly   434 SFGGNVYLNSALAGLVEIP---AIAVAMYIITKVGKKWL--FCA----TLICAGVACCCAAITEG 489
            :..|::|:||.|.||:...   ...:..|...|..:|..  .|:    ::|.|.:|.|....|..
 Worm   356 AVAGSIYMNSILIGLLRYSFSLFSGLLDYKFEKFDRKMCHGICSVVTISIIVAIIAFCLTDTTAT 420

  Fly   490 HADLLWLKITFLMMGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNK 554
            .:.|  ::|..|:....| |....:..:.:.||.||.||::......:.:...::..|::..||.
 Worm   421 FSVL--IRIGVLLSCAMT-SQAIIVASIASNELMPTAIRSISYSTAQLCSRFGIVFAPHVFHLNL 482

  Fly   555 IEG--------HLLMTLLTAWSIFGGFVVLFLPET 581
            ..|        .:|:.:..|..||..|::   |||
 Worm   483 YTGIDFPVLPYAILLAIGLADFIFFRFLI---PET 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 106/423 (25%)
MFS 222..579 CDD:119392 99/401 (25%)
F17C11.12NP_505789.1 2A0119 <109..521 CDD:273328 108/425 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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