DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and C46C2.2

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_501604.2 Gene:C46C2.2 / 177744 WormBaseID:WBGene00008110 Length:520 Species:Caenorhabditis elegans


Alignment Length:489 Identity:105/489 - (21%)
Similarity:184/489 - (37%) Gaps:134/489 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 ETNDNVGN-----TWTSQWDLVCEKEH-LKNVAEMFF-----------------LLGVATGGIIS 233
            |.|:|..|     |.|:..|...||.| ..:.|.|.|                 .:||..|.||.
 Worm    62 EYNENFPNLCANLTGTALSDCHTEKSHSYYSSAAMEFEIYCRPGWKDFRPAFVQYVGVLIGNIIL 126

  Fly   234 GYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGK 298
            ||::|:.|||....:|                        .|:|:.|:|::.:...:|..|:   
 Worm   127 GYVADQIGRKKTFILS------------------------MLIGIPSLSLSATFNSIAAFYI--- 164

  Fly   299 WRTIAGMYNLFPLPISYMIISGLAY---LTQDYQRLQL-----------CIGIPGIF-------- 341
            :|.:.|      :.|:..:|.|.||   |...:||.:|           .:.:..:|        
 Worm   165 FRALTG------IGIAGTMIVGWAYFSELVSPHQRFKLRTFSNWANARIMLTLVALFTGEWRLSS 223

  Fly   342 ----------LCFLWFVVPESPRWLLVKGRIDEV----RRIIEAAAKFNGRQLPADYQLTPPTQE 392
                      |..::|::|||..||..|||.:|.    :||.:.|.        .::...||.::
 Worm   224 HVSAVISLITLAIVYFILPESHIWLRKKGRYEEAEVSRKRIADLAG--------IEFVPMPPPEK 280

  Fly   393 SSTQ-------DVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVE 450
            ::..       ::..:|....||:..:..:.:||...:..|...|.......|.::...|:|:: 
 Worm   281 AADNVEPEKAVNICTVFADPQLRKNILILWLMWFVTGMTAYLTDLCGGDMTKNFWVGQFLSGIL- 344

  Fly   451 IPAIAVAMYI----ITKVGKKW-LFCA-TLICAGVACCCAAITEGHADLLWLKITFLMMGKFTIS 509
            :..:.:.|..    :..:|::: |.|: :|......|..|.:..|.....:....:|....||  
 Worm   345 LSVVRIIMGFADGYLPWMGRRFVLLCSQSLAIVFFGCVIAFLFAGEKGQWYYTAVYLASFVFT-- 407

  Fly   510 AGNTIM--PVY--TAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEG---HLLMTLLTAW 567
               :|:  |.|  .:||.||.:|.....:|::....|.|....||.|..:..   |::...|...
 Worm   408 ---SIVWEPCYLCASELMPTDVRATSTASCSIVGRFANIGASMLSGLKTVYEPGVHMISISLGLT 469

  Fly   568 SIFGGFVVLFLPETAVRQKTDNQGGSSANASAAK 601
            ::...:..|        |:|.|.....|..||||
 Worm   470 NVVAAYFFL--------QETKNCSLDKAGTSAAK 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 97/467 (21%)
MFS 222..579 CDD:119392 85/429 (20%)
C46C2.2NP_501604.2 2A0119 58..486 CDD:273328 100/478 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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