DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and Ust5r

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_599207.2 Gene:Ust5r / 171398 RGDID:620985 Length:552 Species:Rattus norvegicus


Alignment Length:534 Identity:135/534 - (25%)
Similarity:230/534 - (43%) Gaps:66/534 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 MGHYGKWQLLMTVLLSLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVATWRN--------L 145
            :|..|::|:|....:.|..|....|.:...:.||.....|..|. |.::.|:...:        |
  Rat    10 VGSLGRFQILQMAFVFLINVSVVPHSTIENFTAAIPSHRCWVPI-LDNVTVSDNHSRILNQDKLL 73

  Fly   146 SGSV--------DNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVACEKWEYETNDNVGNTWT 202
            ..|:        |.|||:....|..:....|..|  .|.|:.:.   ..:.|.|: ..|..:|..
  Rat    74 KISIPLDSHLRLDKCRRFAQPQWHLLDLNDTFSS--VTEADTEP---CVDGWVYD-RSNFHSTTV 132

  Fly   203 SQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFIS----AVLQTIFGLWLYIC 263
            ::||||||.:.|.:|.:..|::|...|||::|.|||:||||.:|..:    |:.:|..|    ..
  Rat   133 TEWDLVCESQVLNSVTKFSFMIGAFIGGIVNGPLSDRFGRKFVLKCALLQMAITETCVG----FA 193

  Fly   264 SSFELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISY--MIISGLAYLTQ 326
            |:|.:|.:||.|.|:....:..:..:|..|:...|:  :|.|..:.|...|:  ||::|||:..|
  Rat   194 SNFFIYCSLRFLAGMTFEPILVNSNLLMFEWTSHKF--LAMMSVIAPCAGSFGSMILAGLAFQFQ 256

  Fly   327 DYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGR----IDEVRRIIEAAAKFNGRQLPAD---- 383
            ::..|||.:.:|..|...|...:.||.|||:|..:    :.|:|::    |..||.:...|    
  Rat   257 NWHHLQLAMSVPIFFFLILTRWLSESARWLIVTNKPQKGLKELRKV----AHMNGMKNSGDNLTM 317

  Fly   384 --------YQLTPPTQESSTQDVTYLFRSSYLRRISIC---FFCIWFTMNLVYYGIILNMSSFGG 437
                    .:|.......|.:|   ||.:..||: .||   |..|.|.:::  :|:.|::.....
  Rat   318 EVVRTSMKRELEAAKARPSPRD---LFHTPILRK-RICAMSFMRILFMLSI--FGMSLHLQHLSS 376

  Fly   438 NVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLKITFLM 502
            |:.|...:.....:....:..|:..::|::......:...|:....|........:|.:.:..|.
  Rat   377 NIMLLQFVVSASSLLFSVIGPYVFNRMGRRITQMVVMTLRGICILTAVFVPQEMQILRITVVTLA 441

  Fly   503 MGKFTISAGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAW 567
            .....:|.|  :..::|.||.||.:|...:|...:.......|.|...:|.....:|.......:
  Rat   442 GAFSALSFG--VNRLHTNELLPTTLRATAIGVIGMFGNSGFFLAPLFMILASYSPNLPWIFYGGF 504

  Fly   568 SIFGGFVVLFLPET 581
            ||..||.|..||||
  Rat   505 SILNGFTVFLLPET 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 107/414 (26%)
Ust5rNP_599207.2 MFS_OAT 109..516 CDD:340932 109/428 (25%)

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