DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and Ust4r

DIOPT Version :10

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_599206.2 Gene:Ust4r / 171397 RGDID:620976 Length:552 Species:Rattus norvegicus


Alignment Length:536 Identity:130/536 - (24%)
Similarity:229/536 - (42%) Gaps:70/536 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 MGHYGKWQLLMTVLL---SLFQVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVA--TWRNLSGS 148
            :|..|::|:|..|.:   |:..||   ||....:.||.....|..|. |.::.|:  ..|.|:..
  Rat    10 VGGLGRFQILQMVFVVFTSVIVVP---HIIIENFTAAIPSHRCWVPI-LDNVTVSDNDSRILNQD 70

  Fly   149 --------------VDNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVAC-EKWEYETNDNVG 198
                          :|.|||:....|..:....|..|..:...|      .| :.|.|: ..|..
  Rat    71 KLLKISIPLDSHLRLDKCRRFAQPQWHLLDLNDTFSSITEPDTE------PCVDGWVYD-RSNFH 128

  Fly   199 NTWTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFIS----AVLQTIFGLW 259
            :|..::|:||||.:.|.:|.::.|::|...|||::|.|||:||||.:|..:    |:.:|     
  Rat   129 STTVTEWNLVCESQALNSVTKLSFMIGAFIGGIVNGLLSDRFGRKFILKYALLQMAITET----- 188

  Fly   260 LYICSSFE----LYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISG 320
               |:.|.    :|.:||.|.|:....:|.:..:|..|:...|:.|:..:..........||::|
  Rat   189 ---CAGFAPNLFIYCSLRFLAGMSLEPITVNINLLMFEWTSPKFLTMVTVLGSCAGSFGGMILAG 250

  Fly   321 LAYLTQDYQRLQLCIGIPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPAD-- 383
            ||:..|::..|||.:.:|..|...|...:.||.|||:|..:..:..:.::..|..||.:...|  
  Rat   251 LAFQFQNWHHLQLAMSVPIFFFLILTRWLSESARWLIVINKPQKGLKELKKVAHINGMKKSGDNI 315

  Fly   384 ----------YQLTPPTQESSTQDVTYLFRSSYLRR--ISICFFCIWFTMNLVYYGIILNMSSFG 436
                      .:|.......|.:|   ||.:..||:  ..:.|..:.|.::.|  |:.:::....
  Rat   316 TMEVVRTSMKKELEAAKMRPSPRD---LFHTPILRKQIYILSFIRLLFILSGV--GVAIHLQHLS 375

  Fly   437 GNVYLNSALAGLVEIPAIAVAMYIITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLKITFL 501
            .|:.|...|..:..|....:..:::..:|::......:...|::...|.......:.|...:..:
  Rat   376 NNIELLQILISVSSILFSVIGHFVLNHIGRRITQMVIMFLRGISILTAIFAPQEMETLRFIMAMM 440

  Fly   502 MMGKFTIS-AGNTIMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLT 565
            ..|...:| |.|::   :..||.||.:|....|...:...:...|.|...:|.....:|......
  Rat   441 AEGLAALSYAANSL---HANELLPTTLRATARGVIGMFGNIGFFLAPLCMMLASYSPNLPWIFYG 502

  Fly   566 AWSIFGGFVVLFLPET 581
            .::|..||:||.||||
  Rat   503 GFAILSGFIVLLLPET 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 MFS_SLC22 189..579 CDD:340875 99/412 (24%)
Ust4rNP_599206.2 MFS_OAT 109..516 CDD:340932 101/429 (24%)

Return to query results.
Submit another query.