DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and str-176

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001294210.1 Gene:str-176 / 13197055 WormBaseID:WBGene00006220 Length:540 Species:Caenorhabditis elegans


Alignment Length:585 Identity:130/585 - (22%)
Similarity:236/585 - (40%) Gaps:119/585 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SAKQSPTTSPTIPPKQQAATPQSPAAAVSGLDPADDEDETDVIGDLMGHYGKWQLLMTVLLS-LF 106
            |:..|......:.|:...|..|:|......|:...:|.:...:.|.:..  :|..::.:|:: |.
 Worm     8 SSSSSLEQETLLKPEDVEAVVQTPIVPKKSLEMMVEEKKVGSLDDFITL--RWYCMLVLLMAELT 70

  Fly   107 QVPNTFHISSSIYQAANKDFWCQRPAQLQHMPVATWRNLSGS-VDNCRRWEGIDWSQVSNETTLP 170
            ....|......::..||       ||.:         ...|: ::.|.     :.:...|||.| 
 Worm    71 AFTATASSKVMVFAGAN-------PAVI---------GCGGTPLNGCH-----ELAAFRNETNL- 113

  Fly   171 SDWKTPAEMDKKLVACE---KWEYETNDNVGNTWTSQWDLVCE-KEHLKN--VAEMFFLLGVATG 229
                           ||   ::::::..       .:::.:|| .:.:||  ..:.|   ||..|
 Worm   114 ---------------CEPDLRYQFKSVQ-------VEFNYICEDAKKVKNTITVQTF---GVLVG 153

  Fly   230 GIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELY-LTLRALLGLVSVSVTYSGLILAIE 293
            ..|.|.:||.|||:..|.||.:...:|. |:...|....| :..|.|.|:.:..||...::..:|
 Worm   154 AAIFGQVSDTFGRRKALLISTLGNGLFN-WITAYSPDLFYFMVWRTLAGVFTGGVTVVQMVFMVE 217

  Fly   294 YV---DGKW--RTIAGMYNLFPLPISYMIISGLAYLTQDYQRLQLCIGIPGIFLCFLWFVVPESP 353
            .:   |..|  .:|....||...|.       :|:|.||::.:.:.|....|.......::.|||
 Worm   218 NIPRKDRMWIQNSITWSPNLILFPF-------VAWLCQDWRTMSVVIAASSIATFLACLILEESP 275

  Fly   354 RWLLVKGRIDEVRRIIEAAAKFNGRQLPADYQLTPPTQESSTQDVTYLFRSSYLRRIS------- 411
            |||:.||||:|.|:.:....|.:        :|...|.|....:|.::....:.|...       
 Worm   276 RWLIQKGRIEEARKSLIRIRKTD--------KLYDETFEKQLDEVLHVEAEKHARSSKKAKKYTF 332

  Fly   412 ICFFCIWFTM-------------NLVYYGIILNMSSFGGNVYLNSALAG----LVEIPAIAVAMY 459
            |..||.|..:             ..:.|.::.||....|::|.|.|:.|    ::.| |:::|.|
 Worm   333 IHLFCTWKMIAQSLTFITGITCTTFIVYSLMYNMEKLSGSLYWNLAIMGASRWIINI-AVSIADY 396

  Fly   460 IITKVGKKWLFCATLICAGVACCCAAITEGHADLLWLKITFLMMGKFTISAGNTIMPVYTA---- 520
            .:...|:|.:....:||...|....|:      .|:......::...|::|.:....::.|    
 Worm   397 KLPWFGRKMINQIAMICTLFALLMIAV------YLYFGYNGQLIAIGTVAAVSMCSQLFIAKYMM 455

  Fly   521 --ELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFVV--LFLPET 581
              |||||.:||:.|.|.:..:.:..:.:|.|..|:.....:...:|.:..:: .|:|  ||||||
 Worm   456 VNELYPTAVRNLAVSAVSTMSRIGSMFSPQLFYLSDYAEWIPYAVLFSCQLY-DFIVLSLFLPET 519

  Fly   582  581
             Worm   520  519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 119/536 (22%)
MFS 222..579 CDD:119392 96/394 (24%)
str-176NP_001294210.1 2A0119 13..527 CDD:273328 128/580 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.