DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6006 and slc22a20p.1

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:XP_004913725.1 Gene:slc22a20p.1 / 100489586 XenbaseID:XB-GENE-6463910 Length:572 Species:Xenopus tropicalis


Alignment Length:518 Identity:133/518 - (25%)
Similarity:246/518 - (47%) Gaps:38/518 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 MGHYGKWQLLMTVLLSLFQVPNTF---HISSSIYQAANKDFWCQRPA--------QLQHMPVATW 142
            :|..|::|::.|.:|   .:|..|   |.....:.||.....|..|:        ...|:|....
 Frog    10 VGGLGRFQIIHTTML---LIPMLFMGCHNFLQNFSAAVPAHRCWVPSLDNNTMGYDQDHLPAFIP 71

  Fly   143 RNLSGSVDNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVACEKWEYETNDNVGNTWTSQWDL 207
            .:.|....:|.|:.....|..:|.|:  ::...|.|        :.|.|:.:| ..:|..::|||
 Frog    72 MDESEKPLSCLRYRKALHSMWTNGTS--TNHTEPCE--------DGWVYDKSD-FSSTIVTEWDL 125

  Fly   208 VCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSSFELYLTL 272
            ||:...::.:|:..::.||..|.::.|.|||:.||:.:|..|.::..:.|.......:|..|.|.
 Frog   126 VCKLRKMRQIAQSIYMAGVLVGAVLLGGLSDRLGRRALLIGSNLVMAVCGTCAAFLPNFITYCTF 190

  Fly   273 RALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYLTQDYQRLQLCIGI 337
            |.|.|:....:|.:...|.:|:...|.|||.|...........::::.|||..::::.||..:..
 Frog   191 RCLCGIAFSGITLNTNSLILEWTPPKGRTIMGTLFAAGFTCGQILLAALAYGIREWRWLQFAVSA 255

  Fly   338 PGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQ---------LPADYQLTPPTQES 393
            |..|.....::||||.|||::|||..|..:.::..|..||::         :...:..:...|..
 Frog   256 PFYFFFLYSWLVPESARWLILKGRSHEALKALQRVAIINGKREEGQKLSEMILISHMQSELNQVK 320

  Fly   394 STQDVTYLFRSSYLRRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLVEIPAIAVAM 458
            ....:..|||:..:|:::||...:||:..:.:||:.:::.:||.:::|.....|.:::||..||.
 Frog   321 RPHSLFDLFRTPGMRKVTICLMMVWFSSGVAFYGLGMDLQNFGISIFLLQFTFGAIDMPAKVVAA 385

  Fly   459 YIITKVGKKWLFCATLICAGVACCC-AAITEGHADLLWLKITFLMMGKFTISAGNTIMPVYTAEL 522
            .::|.:|::......||.:|||... |.|.:|   :..|::...:.||..::|......:::.||
 Frog   386 LLMTYMGRRVTQATVLILSGVALLTNAFIPQG---MKILRMVLAVFGKGCMAASFACAYLFSGEL 447

  Fly   523 YPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFVVLFLPETAVRQ 585
            :||.||..|:|...:.|.:..::.|.:.||.:|...|...:....:|..|....||.||..:|
 Frog   448 FPTVIRQTGMGVVAMMARVGSVVAPLVLLLWEISPILPSAIYGIAAIIAGGAATFLMETNNQQ 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 130/511 (25%)
MFS 222..579 CDD:119392 97/366 (27%)
slc22a20p.1XP_004913725.1 MFS 101..485 CDD:391944 105/395 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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