DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6006 and slc22a16

DIOPT Version :9

Sequence 1:NP_001097812.1 Gene:CG6006 / 41962 FlyBaseID:FBgn0063649 Length:603 Species:Drosophila melanogaster
Sequence 2:XP_002936981.2 Gene:slc22a16 / 100488673 XenbaseID:XB-GENE-961385 Length:567 Species:Xenopus tropicalis


Alignment Length:523 Identity:144/523 - (27%)
Similarity:249/523 - (47%) Gaps:37/523 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 DLMGHYGKWQLLMTVLLSLFQ-VPNTFHISSSIYQAANKDFWCQRPAQLQH--MPVATWRNLSG- 147
            |.:||:|::|.|: ...|.|| :....|..:|::.|....|.|:.|..:..  :|.|:...|.. 
 Frog     6 DYVGHFGRFQALI-YFSSAFQAISCGIHYLASVFIAITPKFICRAPENISSVLLPNASTLRLEDV 69

  Fly   148 ------------SVDNCRRWEGIDWSQVSNETTLPSDWKTPAEMDKKLVACEKWEYETNDNVGNT 200
                        ..:|...||....|:...|.|  |......:.:|.|.:|....|..|.|:.::
 Frog    70 WELWTPKDYLVVKQENGDIWELNQCSRFKRENT--SYLTYSYDGNKTLFSCSNGYYYDNTNLESS 132

  Fly   201 WTSQWDLVCEKEHLKNVAEMFFLLGVATGGIISGYLSDKFGRKTMLFISAVLQTIFGLWLYICSS 265
            ..:.|.||||:|.|..:.:..|:.||..|.:|.|.::|:.||:.:|::::..|.:||:.:.....
 Frog   133 IVTDWHLVCEREWLAKLIQPTFMFGVLIGAVIFGDIADRVGRRLILWLTSTGQFLFGIAVAFTFD 197

  Fly   266 FELYLTLRALLGLVSVSVTYSGLILAIEYVDGKWRTIAGMYNLFPLPISYMIISGLAYLTQDYQR 330
            :..::.:|.||.:||........:...|||..|.|:.|.|:......:..||:|.:.:|.:.:..
 Frog   198 YYSFVIVRFLLAMVSSGYYVVVFVYVTEYVGIKARSWASMHVHAFFAVGVMIVSLVGFLVRTWWM 262

  Fly   331 LQLCIG---IPGIFLCFLWFVVPESPRWLLVKGRIDEVRRIIEAAAKFNGRQLPADYQLTPPTQE 392
            .|:.:.   :|.:..|::   :||:|.||..:|:..||.::|....|:|....|.........||
 Frog   263 YQIILSLTTLPFVLCCWM---LPETPFWLYSQGKHKEVEKLIGTIEKWNKISTPCKLSELCSVQE 324

  Fly   393 SSTQDVTYLFRSSYL--------RRISICFFCIWFTMNLVYYGIILNMSSFGGNVYLNSALAGLV 449
            :...::..|.:.|.|        .|.::..:.||||.:|.||...||..:.|||.|||..|...|
 Frog   325 TQKTEMDTLKKHSVLDLFYNWSFARRTVTVWLIWFTGSLGYYVFALNSVNLGGNEYLNLFLTSAV 389

  Fly   450 EIPAIAVAMYIITKVGKKWLFCATLICAGVAC-CCAAITEGHADLLWLKITFLMMGKFTISAGNT 513
            |||:..||.:.:.|:|::......||.:.|.| ....|.:.|:.   :.|...|.|||:|:....
 Frog   390 EIPSYIVACFGMDKIGRRNTLAPFLILSAVICGIIMLIPQDHST---VTIAMSMGGKFSIAVAFG 451

  Fly   514 IMPVYTAELYPTPIRNVGVGACNVAAGLALILTPYLSLLNKIEGHLLMTLLTAWSIFGGFVVLFL 578
            ::.:||||||||.:|::.||:.::...:..::.|:...|..:...:...|:...:...|.:.|.|
 Frog   452 LIYLYTAELYPTIVRSLAVGSGSMMCRIGSVVAPFCVYLTDVWIFMPQMLVGIMAFLTGVLTLKL 516

  Fly   579 PET 581
            |||
 Frog   517 PET 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6006NP_001097812.1 2A0119 90..581 CDD:273328 141/518 (27%)
MFS 222..579 CDD:119392 102/368 (28%)
slc22a16XP_002936981.2 MFS_SLC22A16_CT2 111..517 CDD:340933 115/411 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.