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Protein Alignment Fer2 and Msgn1
DIOPT Version :9
Sequence 1: | NP_001287359.1 |
Gene: | Fer2 / 41961 |
FlyBaseID: | FBgn0038402 |
Length: | 283 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001103021.1 |
Gene: | Msgn1 / 689864 |
RGDID: | 1587516 |
Length: | 187 |
Species: | Rattus norvegicus |
Alignment Length: | 131 |
Identity: | 36/131 - (27%) |
Similarity: | 57/131 - (43%) |
Gaps: | 38/131 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 116 CGNAGSATPGG-------AGGP----------NPGY----GSVGAATASSYKM---QRQAANVRE 156
||::|::|.|. |||. .|.| |.:.....|..|| :|:.|:.||
Rat 63 CGHSGASTGGSDGYSSHEAGGLVELDYSMLAFQPSYIHAAGGLKGQKGSKVKMSVQRRRKASERE 127
Fly 157 RKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKR---LSKIDTLRLAIAYISLLREVLQTDYD 218
:.|:: ::..|...||.::|.. |.:| |:||.||:..|.||..|.::|....:
Rat 128 KLRMR----------TLADALHTLRNYLPPV-YSQRGQPLTKIQTLKYTIKYIRELTDLLNGGRE 181
Fly 219 P 219
|
Rat 182 P 182
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer2 | NP_001287359.1 |
HLH |
148..210 |
CDD:278439 |
19/64 (30%) |
Msgn1 | NP_001103021.1 |
HLH |
119..173 |
CDD:278439 |
19/64 (30%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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