DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and Ascl1

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_071779.1 Gene:Ascl1 / 64186 RGDID:71010 Length:233 Species:Rattus norvegicus


Alignment Length:195 Identity:46/195 - (23%)
Similarity:65/195 - (33%) Gaps:78/195 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 APLMCNSPSASSSGGGCGNAGSATP-GGAGGPN----------PGYGSVGAATASSYKMQRQAA- 152
            ||.:........||||..:|..... ..:..|.          .|:|       .|...|:.|| 
  Rat    60 APQLSPVADGQPSGGGHKSAAKQVKRQRSSSPELMRCKRRLNFSGFG-------YSLPQQQPAAV 117

  Fly   153 ---NVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVL- 213
               |.|||.|::          .:|..|..||.|||.....|::||::|||.|:.||..|:::| 
  Rat   118 ARRNERERNRVK----------LVNLGFATLREHVPNGAANKKMSKVETLRSAVEYIRALQQLLD 172

  Fly   214 ----------------------------------------QTDYDPLTYVEKCLRGEIKADRANW 238
                                                    :..||||:..|:.|     .|..||
  Rat   173 EHDAVSAAFQAGVLSPTISPNYSNDLNSMAGSPVSSYSSDEGSYDPLSPEEQEL-----LDFTNW 232

  Fly   239  238
              Rat   233  232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 24/65 (37%)
Ascl1NP_071779.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..95 8/34 (24%)
HLH 131..173 CDD:197674 18/41 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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