DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and Hand1

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_067603.1 Gene:Hand1 / 59112 RGDID:621206 Length:216 Species:Rattus norvegicus


Alignment Length:182 Identity:55/182 - (30%)
Similarity:76/182 - (41%) Gaps:47/182 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 NLLDSSTNPMGVHNSGGGAPLMCNSPSASSSGGGC------------GNAGSATPGGAGGPNP-- 132
            ||:.|..:....|:|....| |.:.|........|            ..|.:|....||||.|  
  Rat     2 NLVGSYAHHHHHHHSHPPHP-MLHEPFLFGPASRCHQERPYFQSWLLSPADAAPDFPAGGPPPTT 65

  Fly   133 -----GYG-------SVGAATASSYKMQRQAAN--VRERKRIQRSAPTGYTKCSINSAFDELRVH 183
                 .||       |.|...|...::.|:..:  .:||:|.:          ||||||.|||..
  Rat    66 AVAAAAYGPDARPSQSPGRLEALGGRLPRRKGSGPKKERRRTE----------SINSAFAELREC 120

  Fly   184 VPTFPYEKRLSKIDTLRLAIAYISLLREVLQTDY---DPLTYVEKCLRGEIK 232
            :|..|.:.:||||.|||||.:||:.|.:||..|.   ||     :..:.|:|
  Rat   121 IPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQAGDP-----EAFKAELK 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 26/63 (41%)
Hand1NP_067603.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 5/17 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..109 8/45 (18%)
HLH 103..152 CDD:197674 28/58 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 165..203 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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