DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and scxb

DIOPT Version :10

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:XP_021328670.1 Gene:scxb / 567817 ZFINID:ZDB-GENE-090806-1 Length:200 Species:Danio rerio


Alignment Length:150 Identity:48/150 - (32%)
Similarity:66/150 - (44%) Gaps:40/150 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 MCNSPSASSSGGGCGNAGSATPGGA-GGPNPGYGS--VGA----------------ATASSYKMQ 148
            :|:..:..|.....|:.||.:...: ...:.||||  :|.                .|..:...|
Zfish    14 LCSEINMHSEDDDNGSEGSGSEDKSFRTSSHGYGSFKLGVRKKRYSCRPLAIPTELCTPITEVRQ 78

  Fly   149 RQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVL 213
            |..||.|||:|..          |:|:||..||..:||.|.:::||||:|||||.:|||.|..||
Zfish    79 RNTANARERERTN----------SVNTAFTALRTLIPTEPADRKLSKIETLRLASSYISHLGNVL 133

  Fly   214 QT-----DYDPLTYVEKCLR 228
            ..     |..|      |||
Zfish   134 LVGEECGDGQP------CLR 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 bHLH_SF 144..216 CDD:469605 32/76 (42%)
scxbXP_021328670.1 bHLH_SF 75..142 CDD:469605 32/76 (42%)

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