DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and mespb

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001016653.1 Gene:mespb / 549407 XenbaseID:XB-GENE-970939 Length:292 Species:Xenopus tropicalis


Alignment Length:183 Identity:49/183 - (26%)
Similarity:74/183 - (40%) Gaps:45/183 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 LSSNNLRHIQQH--YMQH----------SGENLLDSSTNPMGVHNSGGGAP----------LMCN 105
            :.|.::.|.||.  ..||          |.|..  ||.:|....:|.|.:|          :..|
 Frog     1 MDSFSVAHHQQDCTLNQHCATLYPCGYPSSEGY--SSLSPASSSDSSGQSPPYMPYIASQEIFVN 63

  Fly   106 SPSASSSGGGCGNAGSATPGGAGGPNPGYGSVGAATASSYKMQRQAANVRERKRIQRSAPTGYTK 170
            .|:|... ..|...|........|..    :.|....|    |||:|:.||:.|::         
 Frog    64 IPAAYGQ-AACQRRGLRHDADKRGKK----NTGKLPYS----QRQSASEREKLRMR--------- 110

  Fly   171 CSINSAFDELRVHVP--TFPYEKRLSKIDTLRLAIAYISLLREVLQTDYDPLT 221
             :::.|...||.::|  ..|.:|.|:||:||:|.|:|||.|...|....:.||
 Frog   111 -NLSKALQNLRRYLPPSVAPLDKTLTKIETLQLTISYISHLSAQLGLTEEILT 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 23/63 (37%)
mespbNP_001016653.1 HLH 97..150 CDD:278439 23/62 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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