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Protein Alignment Fer2 and Atoh1
DIOPT Version :9
Sequence 1: | NP_001287359.1 |
Gene: | Fer2 / 41961 |
FlyBaseID: | FBgn0038402 |
Length: | 283 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102708.1 |
Gene: | Atoh1 / 500156 |
RGDID: | 1565171 |
Length: | 351 |
Species: | Rattus norvegicus |
Alignment Length: | 161 |
Identity: | 47/161 - (29%) |
Similarity: | 66/161 - (40%) |
Gaps: | 44/161 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 YMQHSGENLLDSSTNP------MG--VHNSGGG------APLMCNSPSASSSGG------GCGNA 119
|:.||.|.....:..| .| |..||.| .|:..........|| ||...
Rat 78 YLLHSPELGASEAAAPGDEADGQGELVRRSGCGGLSKSPGPVKVREQLCKLKGGVVVDELGCSRQ 142
Fly 120 GSATPGGAGGPNPGYGSVGAATASSYKMQRQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHV 184
.:.:.....|.. |.:|.|||.|||:|:. .:|.|||:||..:
Rat 143 RAPSSKQVNGVQ--------------KQRRLAANARERRRMH----------GLNHAFDQLRNVI 183
Fly 185 PTFPYEKRLSKIDTLRLAIAYISLLREVLQT 215
|:|..:|:|||.:||::|..||:.|.|:|||
Rat 184 PSFNNDKKLSKYETLQMAQIYINALSELLQT 214
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer2 | NP_001287359.1 |
HLH |
148..210 |
CDD:278439 |
25/61 (41%) |
Atoh1 | NP_001102708.1 |
HLH |
155..213 |
CDD:238036 |
28/67 (42%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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