DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and atoh1b

DIOPT Version :10

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001122151.1 Gene:atoh1b / 493915 ZFINID:ZDB-GENE-041201-1 Length:206 Species:Danio rerio


Alignment Length:110 Identity:38/110 - (34%)
Similarity:57/110 - (51%) Gaps:23/110 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 NSPSASSSGGGCGNAGSATPGGAGGPNPGYGSVGAATASSYKMQRQAANVRERKRIQRSAPTGYT 169
            :||.|:|.....|:  .|.||..           |:.:...:.:|.|||.|||:|:.        
Zfish    64 SSPQAASEDHHAGS--KARPGSK-----------ASVSGPQRHRRVAANARERRRMH-------- 107

  Fly   170 KCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVLQ 214
              .:|.|||:||..:|:...||:|||.|||::|..||:.|.|:|:
Zfish   108 --GLNRAFDKLRSVIPSLENEKKLSKYDTLQMAQIYITELSELLE 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 bHLH_SF 144..216 CDD:469605 29/71 (41%)
atoh1bNP_001122151.1 bHLH_TS_ATOH1 89..152 CDD:381556 29/72 (40%)

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