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Protein Alignment Fer2 and ptf1a
DIOPT Version :9
Sequence 1: | NP_001287359.1 |
Gene: | Fer2 / 41961 |
FlyBaseID: | FBgn0038402 |
Length: | 283 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_997524.1 |
Gene: | ptf1a / 368662 |
ZFINID: | ZDB-GENE-030616-579 |
Length: | 265 |
Species: | Danio rerio |
Alignment Length: | 171 |
Identity: | 66/171 - (38%) |
Similarity: | 85/171 - (49%) |
Gaps: | 36/171 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 71 IQQHYMQHSGENLLDSSTNPMGVHNSGGGAPLMCNSPSASSSGGGCGNAGSATPGGAGGPNPGYG 135
||::|. ||..:..|.:...|.... |.|:|:...||.::.|.......| |..
Zfish 51 IQEYYK--------DSRISQDGDYCDVGNFSF---SSSSSTFSYGCADSTSELSPHRDG---GLL 101
Fly 136 SVGAATASSYKMQ--RQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDT 198
.......|..:|| |||||||||:|:| |||.||:.||.|:||.||||||||:||
Zfish 102 KRRRRMRSEVEMQQLRQAANVRERRRMQ----------SINDAFEGLRSHIPTLPYEKRLSKVDT 156
Fly 199 LRLAIAYISLLREVLQTDY-------DPLTYVEK---CLRG 229
|||||.||:.|.|::|:|. |.|...:| |.||
Zfish 157 LRLAIGYINFLAELVQSDMPIRNPHSDALNQPKKVIICHRG 197
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer2 | NP_001287359.1 |
HLH |
148..210 |
CDD:278439 |
39/63 (62%) |
ptf1a | NP_997524.1 |
HLH |
121..173 |
CDD:197674 |
36/61 (59%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2562 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.840 |
|
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