DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and ptf1a

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_997524.1 Gene:ptf1a / 368662 ZFINID:ZDB-GENE-030616-579 Length:265 Species:Danio rerio


Alignment Length:171 Identity:66/171 - (38%)
Similarity:85/171 - (49%) Gaps:36/171 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 IQQHYMQHSGENLLDSSTNPMGVHNSGGGAPLMCNSPSASSSGGGCGNAGSATPGGAGGPNPGYG 135
            ||::|.        ||..:..|.:...|....   |.|:|:...||.::.|.......|   |..
Zfish    51 IQEYYK--------DSRISQDGDYCDVGNFSF---SSSSSTFSYGCADSTSELSPHRDG---GLL 101

  Fly   136 SVGAATASSYKMQ--RQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDT 198
            .......|..:||  |||||||||:|:|          |||.||:.||.|:||.||||||||:||
Zfish   102 KRRRRMRSEVEMQQLRQAANVRERRRMQ----------SINDAFEGLRSHIPTLPYEKRLSKVDT 156

  Fly   199 LRLAIAYISLLREVLQTDY-------DPLTYVEK---CLRG 229
            |||||.||:.|.|::|:|.       |.|...:|   |.||
Zfish   157 LRLAIGYINFLAELVQSDMPIRNPHSDALNQPKKVIICHRG 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 39/63 (62%)
ptf1aNP_997524.1 HLH 121..173 CDD:197674 36/61 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2562
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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