DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer2 and Ascl5

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:XP_017454536.1 Gene:Ascl5 / 363991 RGDID:1561854 Length:188 Species:Rattus norvegicus


Alignment Length:140 Identity:45/140 - (32%)
Similarity:57/140 - (40%) Gaps:30/140 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 MGVHNSGGGAPLMCNSPSASSSGGGCGNAGSATPGGAGGPN--PGYGSV-------GAATASSYK 146
            :||....|..||....|        .||.......|...|:  ..|..|       ||.....|.
  Rat    20 LGVVAPAGPTPLAATEP--------LGNVPFLLYPGHSEPSYYDAYTGVFPYVPFPGAFGVYDYP 76

  Fly   147 MQR---QAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISL 208
            .:.   |..|.|||:|:         || :|..:..||.|:|....||||||::|||.||.||..
  Rat    77 FEPAFIQKRNERERQRV---------KC-VNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKY 131

  Fly   209 LREVLQTDYD 218
            |:|:|....|
  Rat   132 LQELLSAAPD 141

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 26/64 (41%)
Ascl5XP_017454536.1 HLH 86..136 CDD:197674 27/59 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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