DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and HLH3B

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_525055.1 Gene:HLH3B / 31249 FlyBaseID:FBgn0011276 Length:376 Species:Drosophila melanogaster


Alignment Length:303 Identity:76/303 - (25%)
Similarity:110/303 - (36%) Gaps:112/303 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LPSCIYAGQHQGGGATGGGGGSG-------------GGGGSSGLRLSSNN----LRHIQQHYMQH 78
            |||......:....:|...|.||             .|.||.....:..:    |||...| :|.
  Fly     4 LPSSSNGADNADERSTASSGSSGHSQTNESPRSGHLNGNGSMRDTAAGRHPPALLRHATPH-LQP 67

  Fly    79 SGENLLDS--------------------------------------STNPMGVHNSGGGAPLMCN 105
            ..|::.|.                                      |::|.. |:..|    :..
  Fly    68 KTESISDGDGDAELSDFSLNDTEEDEEDLRDYIVLNGNQADANRSLSSSPRS-HSRNG----LLT 127

  Fly   106 SPSASSS-------GGGCGNAGSATPGGAGGPNPGYGSVGAATASSYKMQRQAANVRERKRIQRS 163
            :|::|.|       |||.|:.|:|:.||..|       |||...    :::...|.|||.|.|  
  Fly   128 APASSGSSVGGSGGGGGNGSGGNASSGGGSG-------VGATGG----VRKVFTNTRERWRQQ-- 179

  Fly   164 APTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVL-----QTDYDPLTYV 223
                    :::.||.|||..|||.|.:|:|||.:.||.||.||.||..:|     |....|    
  Fly   180 --------NVSGAFAELRKLVPTHPPDKKLSKNEILRSAIKYIKLLTGILEWQQRQAPSHP---- 232

  Fly   224 EKCLRGEIKADR-----ANWNTSDLTARLSWINWENLGVHPGR 261
               :|.:::.:.     ||.:.:|      ..|.||..|.|.|
  Fly   233 ---IRAQMEPNNNDNRMANGHAAD------GENLENPDVPPVR 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 26/61 (43%)
HLH3BNP_525055.1 HLH 171..222 CDD:197674 27/60 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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