DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and Lyl1

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001007678.1 Gene:Lyl1 / 304663 RGDID:1359244 Length:278 Species:Rattus norvegicus


Alignment Length:102 Identity:33/102 - (32%)
Similarity:46/102 - (45%) Gaps:23/102 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 GAGGP-----------NPGYGSVGAATA-SSYKMQRQA-ANVRERKRIQRSAPTGYTKCSINSAF 177
            |..||           .|.:|.:..... ...|:.|:. .|.|||.|.|.          :|.||
  Rat   115 GPAGPFSIFPNSRLKRRPSHGELDLVDGHQPQKVARRVFTNSRERWRQQH----------VNGAF 169

  Fly   178 DELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREVLQ 214
            .|||..:||.|.:::|||.:.||||:.||..|..:|:
  Rat   170 AELRKLLPTHPPDRKLSKNEVLRLAMKYIGFLVRLLR 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 25/62 (40%)
Lyl1NP_001007678.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
HLH 155..207 CDD:197674 26/62 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..278
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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