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Protein Alignment Fer2 and Ascl4
DIOPT Version :9
Sequence 1: | NP_001287359.1 |
Gene: | Fer2 / 41961 |
FlyBaseID: | FBgn0038402 |
Length: | 283 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038935995.1 |
Gene: | Ascl4 / 299687 |
RGDID: | 1307533 |
Length: | 145 |
Species: | Rattus norvegicus |
Alignment Length: | 94 |
Identity: | 32/94 - (34%) |
Similarity: | 46/94 - (48%) |
Gaps: | 26/94 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 121 SATPGGAGGPNPGYGSVGAATASSYKMQRQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVP 185
|..|||...| ::..|| |.|||:|: :| :|..:..||.|:|
Rat 49 SLPPGGVAEP-------------AFLRQR---NERERQRV---------RC-VNEGYARLRQHLP 87
Fly 186 TFPYEKRLSKIDTLRLAIAYISLLREVLQ 214
.....:||||::|||.||.||..|:|:|:
Rat 88 RELAGQRLSKVETLRAAIGYIKQLQELLE 116
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer2 | NP_001287359.1 |
HLH |
148..210 |
CDD:278439 |
24/61 (39%) |
Ascl4 | XP_038935995.1 |
bHLH_SF |
57..116 |
CDD:412148 |
27/84 (32%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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