DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and Ascl2

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_113691.1 Gene:Ascl2 / 24209 RGDID:2159 Length:260 Species:Rattus norvegicus


Alignment Length:136 Identity:41/136 - (30%)
Similarity:57/136 - (41%) Gaps:26/136 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 HNSGGGAPLMCNSPSASSS---GGGCGNAGSATPGGAGG-------PNPGY------GSVGAATA 142
            |.|.|....:..:|:.::|   ||........:.|.||.       |:|..      ...||..|
  Rat    49 HFSCGAPKPVAGAPALNASLMDGGALPRLVPTSSGVAGACTARRRPPSPELLRCSRRRRSGATEA 113

  Fly   143 SSYKMQRQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYIS 207
            ||........|.|||.|::          .:|..|..||.|||.....|:|||::|||.|:.||.
  Rat   114 SSSSAAVARRNERERNRVK----------LVNLGFQALRQHVPHGGANKKLSKVETLRSAVEYIR 168

  Fly   208 LLREVL 213
            .|:.:|
  Rat   169 ALQRLL 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 22/61 (36%)
Ascl2NP_113691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 85..126 10/40 (25%)
HLH 134..176 CDD:197674 19/41 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 191..239
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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