DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Fer2 and ascl2

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:XP_002940290.3 Gene:ascl2 / 100494131 XenbaseID:XB-GENE-6458615 Length:236 Species:Xenopus tropicalis


Alignment Length:127 Identity:37/127 - (29%)
Similarity:52/127 - (40%) Gaps:42/127 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 PMGVHN-SGGGAPLMCNSPSASSSGGGCGNAGSATPGGAGGPNPGYGSVGAATASSYKMQRQAAN 153
            |..|.| ||....|.|...|.|.                  ||    ::|.:..|      :..|
 Frog    81 PRKVANQSGSPQRLRCQRRSGSL------------------PN----AIGISATS------ERRN 117

  Fly   154 VRERKRIQRSAPTGYTKCSINSAFDELRVHVPTF--PYEKRLSKIDTLRLAIAYISLLREVL 213
            .|||.|::          .:|..|.:||.|||..  | .|::||::|||.|:.||..|:.:|
 Frog   118 ERERNRVK----------LVNLGFAKLRQHVPQAQGP-NKKMSKVETLRSAVEYIRALQSIL 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 22/63 (35%)
ascl2XP_002940290.3 bHLH_TS_ASCL2_Mash2 110..174 CDD:381586 25/76 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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