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Protein Alignment Fer2 and onecut3
DIOPT Version :9
Sequence 1: | NP_001287359.1 |
Gene: | Fer2 / 41961 |
FlyBaseID: | FBgn0038402 |
Length: | 283 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002938867.1 |
Gene: | onecut3 / 100491290 |
XenbaseID: | XB-GENE-484505 |
Length: | 439 |
Species: | Xenopus tropicalis |
Alignment Length: | 148 |
Identity: | 34/148 - (22%) |
Similarity: | 43/148 - (29%) |
Gaps: | 46/148 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 PISHLP--------FHNFDDDLINDLPSCIYAGQHQGGGATGGGGGS------GGGGGSSGLRLS 64
|:.||| ||: |...:...|......|...|| ..|..|.|
Frog 91 PLQHLPPISTVSDKFHH---------PHHHHHHHHHHQRLAGNVSGSFTLMRDERGLASMG---- 142
Fly 65 SNNLRHIQQHY---MQHSGENLLDSSTNPMGVHNS-------GGGAPL----MCNSPSASSSGGG 115
::..|| |...|:.|...|.....:||| |.|..| |.:..|..|....
Frog 143 -----NLYGHYPKDMTTMGQPLSPLSNGLGTLHNSQQSLGPYGPGGHLSNEKMLSPNSFDSHAAM 202
Fly 116 CGNAGSATPGGAGGPNPG 133
...:......|.|||..|
Frog 203 LSRSEDHLTRGLGGPGAG 220
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Fer2 | NP_001287359.1 |
HLH |
148..210 |
CDD:278439 |
|
onecut3 | XP_002938867.1 |
CUT |
262..332 |
CDD:367059 |
|
HOX |
359..414 |
CDD:197696 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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