DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and lyl1

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:XP_009300341.1 Gene:lyl1 / 100333113 ZFINID:ZDB-GENE-090807-1 Length:326 Species:Danio rerio


Alignment Length:129 Identity:39/129 - (30%)
Similarity:53/129 - (41%) Gaps:39/129 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 QRQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYISLLREV 212
            :|...|.|||.|.|          ::|.||.|||..:||.|.:::|||.:.||||:.||..|.::
Zfish   201 RRVFTNSRERWRQQ----------NVNGAFSELRKLIPTHPPDRKLSKNEILRLAMKYIDFLEQL 255

  Fly   213 LQTDYDPLTYVEKCLRGEIKADRANWNTSDLTARLSWINWENLGVHPGRRTLLTSLALSSEPMC 276
            |.....|          |....||:.:|                  |...:||. |..||...|
Zfish   256 LNDQSQP----------EETGQRAHAHT------------------PSTHSLLL-LTASSGSSC 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 25/61 (41%)
lyl1XP_009300341.1 HLH 206..256 CDD:197674 25/59 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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