DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fer2 and mespbb

DIOPT Version :9

Sequence 1:NP_001287359.1 Gene:Fer2 / 41961 FlyBaseID:FBgn0038402 Length:283 Species:Drosophila melanogaster
Sequence 2:NP_001252536.1 Gene:mespbb / 100148845 ZFINID:ZDB-GENE-110609-1 Length:244 Species:Danio rerio


Alignment Length:154 Identity:45/154 - (29%)
Similarity:68/154 - (44%) Gaps:32/154 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 SSNNLRHIQQHYMQHSGENLLDSSTNPMGVHNSGGGAPLMCNSPSASSSGGGCGNAGSATP---- 124
            ||....:|||:  ..|.::.|.:.::|..|..|.    .|..||||        .|.|.:|    
Zfish     4 SSPFFNYIQQN--SWSSDSELYNISSPETVSPSS----YMDFSPSA--------QAQSVSPKPEI 54

  Fly   125 GGAGGPNPGYGSVGA--ATASSYKMQRQAANVRERKRIQRSAPTGYTKCSINSAFDELRVHVP-- 185
            .|:...:.|...||.  ....:...|||:|:.:|:.|::          .:..|...||.::|  
Zfish    55 SGSSFQDGGRSRVGVRRTRCKNPSKQRQSASEKEKLRMR----------DLTKALHHLRTYLPPS 109

  Fly   186 TFPYEKRLSKIDTLRLAIAYISLL 209
            ..|..:.|:||:||||.|.|||.|
Zfish   110 VAPVGQTLTKIETLRLTIRYISYL 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fer2NP_001287359.1 HLH 148..210 CDD:278439 23/64 (36%)
mespbbNP_001252536.1 HLH 80..133 CDD:278439 22/62 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4029
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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