DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5916 and Sgsm2

DIOPT Version :10

Sequence 1:NP_650524.1 Gene:CG5916 / 41960 FlyBaseID:FBgn0038401 Length:330 Species:Drosophila melanogaster
Sequence 2:NP_001361617.1 Gene:Sgsm2 / 97761 MGIID:2144695 Length:1050 Species:Mus musculus


Alignment Length:285 Identity:57/285 - (20%)
Similarity:117/285 - (41%) Gaps:75/285 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 PGPYRP-----------DVWMKISGAAAAQRRSPDLFRNLLRTEPFDKEISDSISIDLPRTFPDN 125
            |||:.|           :...:::...||               .:..|:.|:::::|.|...|.
Mouse   796 PGPHDPGQETLAPASELEAGQELAAVCAA---------------AYTIELLDTVALNLHRIDKDV 845

  Fly   126 IHFD--------MKKQRLYNILIAYAHHNRDVGYCQGLNYIAGLLLIVTDDEEKSFWLLKHIVEN 182
            ...|        ...:||.:|:.:|...:.|:||.||:..:...||::.|:::.::....|:::.
Mouse   846 QRCDRNYWYFTTSNLERLRDIMCSYVWEHLDMGYVQGMCDLLAPLLVILDNDQLAYSCFSHLMKR 910

  Fly   183 IVPQY--------HSHNMANLLR--DLAVFRELVIRRIPAVNRHVDNLGLPYPVIASKWFICIFA 237
            :...:        |..||.:|::  |..:| ||:         | .|....:.....:||:..|.
Mouse   911 MGQNFPSGGAMDSHFANMRSLIQILDSELF-ELM---------H-QNGDYTHFYFCYRWFLLDFK 964

  Fly   238 EVLPVETVLRIWDCVFAEGYKIVFRAALTMFVTHKNAILGCDDIAALANLFRDTMIQDNIV--TD 300
            ..|..|.|..:|:.::|.  :.:......:|:.           .||...:|: :|:||.:  ||
Mouse   965 RELLYEDVFAVWEVIWAA--RRISSEHFVLFIA-----------LALVEAYRE-IIRDNNMDFTD 1015

  Fly   301 CHGFVEAMFSLRLKRSELESLRKVA 325
            ...|    |:.|.:|.:.:.:.::|
Mouse  1016 IIKF----FNERAERHDAQEILRIA 1036

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5916NP_650524.1 TBC 67..276 CDD:214540 44/232 (19%)
Sgsm2NP_001361617.1 RUN_SGSM2 18..197 CDD:439066
PH_RUTBC 256..424 CDD:275431
TBC <838..1006 CDD:214540 39/192 (20%)
Blue background indicates that the domain is not in the aligned region.

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